RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 DDAH1O94760 285 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 CELF2O95319 508 aaKnown RBP13.86□□□□□ -0.19
RNF13-208ENST00000467996 PTPRAP18433 802 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 RXRAP19793 462 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 ST3GAL1Q11201 340 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 STK3Q13188 491 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 ANKRD13AQ8IZ07 590 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 SMC1BQ8NDV3 1235 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 MKL1Q969V6 931 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 GBA2Q9HCG7 927 aaPredicted RBP13.86□□□□□ -0.19
RNF13-208ENST00000467996 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 SH2B1Q9NRF2 756 aaPredicted RBP13.86□□□□□ -0.19
RNF13-208ENST00000467996 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 CSADQ9Y600 493 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
RNF13-208ENST00000467996 A0A1W2PRG0 241 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 PFKFB2O60825 505 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 ECE1P42892 770 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
RNF13-208ENST00000467996 RCAN1P53805 252 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 FKBP1BP68106 108 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 SCRN1Q12765 414 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 TROAPQ12815 778 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 SYNE3Q6ZMZ3 975 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 RASGRP2Q7LDG7 609 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 CCDC144CPQ8IYA2 1237 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 NECAB1Q8N987 351 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
RNF13-208ENST00000467996 ACER1Q8TDN7 264 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 NUP133Q8WUM0 1156 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
RNF13-208ENST00000467996 SYNPO2Q9UMS6 1093 aa13.85□□□□□ -0.19
RNF13-208ENST00000467996 UBE2Q2LH0YL09 131 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 TOMM70O94826 608 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 CALM1P0DP23 149 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 CALM2P0DP24 149 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 CALM3P0DP25 149 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
RNF13-208ENST00000467996 LDLRAD1Q5T700 205 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 CST9Q5W186 159 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 CCDC83Q8IWF9 413 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 ELP3Q9H9T3 547 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
RNF13-208ENST00000467996 MTMR7Q9Y216 660 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
RNF13-208ENST00000467996 PDHBP11177 359 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 CUL4AQ13619 759 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 GRM4Q14833 912 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 RTN1Q16799 776 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 C2orf69Q8N8R5 385 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 FEZ1Q99689 392 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 WDR18Q9BV38 432 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 SH2D4AQ9H788 454 aa13.83□□□□□ -0.2
RNF13-208ENST00000467996 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
RNF13-208ENST00000467996 SPDYE5A6NIY4 337 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 UNCXA6NJT0 531 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 NDUFB10O96000 172 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 SNHG28P0DPA3 235 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 CDC27P30260 824 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 SLC4A3P48751 1232 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 MTMR2Q13614 643 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 ZYXQ15942 572 aaKnown RBP13.82□□□□□ -0.2
RNF13-208ENST00000467996 FANCBQ8NB91 859 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 ZNF280CQ8ND82 737 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
RNF13-208ENST00000467996 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 IPO9Q96P70 1041 aaKnown RBP13.82□□□□□ -0.2
RNF13-208ENST00000467996 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 VCPKMTQ9H867 229 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 GOPCQ9HD26 462 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
RNF13-208ENST00000467996 ZHX2Q9Y6X8 837 aa13.82□□□□□ -0.2
RNF13-208ENST00000467996 USP17L10C9JJH3 530 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 F5H6K3 240 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 RAD21O60216 631 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 PPATQ06203 517 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 KLRC3Q07444 240 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 FSTL1Q12841 308 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 SPP2Q13103 211 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 KIAA1755Q5JYT7 1200 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 SLFN13Q68D06 897 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 ERO1BQ86YB8 467 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 DCAF4Q8WV16 495 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
RNF13-208ENST00000467996 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 AFG3L2Q9Y4W6 797 aa13.81□□□□□ -0.2
RNF13-208ENST00000467996 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
RNF13-208ENST00000467996 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
RNF13-208ENST00000467996 TRIM75PA6NK02 468 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms