RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 PPARAQ07869 468 aa16.46■□□□□ 0.23
SEC16A-208ENST00000467838 BEND6Q5SZJ8 279 aaPredicted RBP16.46■□□□□ 0.23
SEC16A-208ENST00000467838 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
SEC16A-208ENST00000467838 ZKSCAN3Q9BRR0 538 aa16.46■□□□□ 0.23
SEC16A-208ENST00000467838 LIMA1Q9UHB6 759 aaKnown RBP16.46■□□□□ 0.23
SEC16A-208ENST00000467838 FAM205CA6NFA0 338 aa16.46■□□□□ 0.22
SEC16A-208ENST00000467838 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.22
SEC16A-208ENST00000467838 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.22
SEC16A-208ENST00000467838 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.22
SEC16A-208ENST00000467838 RRP12Q5JTH9 1297 aaKnown RBP16.46■□□□□ 0.22
SEC16A-208ENST00000467838 EPSTI1Q96J88 318 aa16.46■□□□□ 0.22
SEC16A-208ENST00000467838 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.22
SEC16A-208ENST00000467838 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
SEC16A-208ENST00000467838 H3BQF6 201 aa16.45■□□□□ 0.22
SEC16A-208ENST00000467838 E2F4Q16254 413 aa16.45■□□□□ 0.22
SEC16A-208ENST00000467838 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
SEC16A-208ENST00000467838 CMTR1Q8N1G2 835 aaKnown RBP16.45■□□□□ 0.22
SEC16A-208ENST00000467838 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
SEC16A-208ENST00000467838 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
SEC16A-208ENST00000467838 LZTFL1Q9NQ48 299 aa16.45■□□□□ 0.22
SEC16A-208ENST00000467838 A0A1B0GUL6 1792 aa16.45■□□□□ 0.22
SEC16A-208ENST00000467838 MYH8P13535 1937 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 TNKSO95271 1327 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 CASP14P31944 242 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 ATP2C1P98194 919 aaPredicted RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 TRIM14Q14142 442 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 NPY5RQ15761 445 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 DDB1Q16531 1140 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 WHAMMP3Q1A5X7 153 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 ESR2Q92731 530 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 SLC4A9Q96Q91 983 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 XDHP47989 1333 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 A0A0U1RQJ8 604 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 CTAGE9A4FU28 777 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 TUBBP07437 444 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 FXR1P51114 621 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 SPAG1Q07617 926 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 VPS72Q15906 364 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 IQUBQ8NA54 791 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 NUP133Q8WUM0 1156 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 ATRIPQ8WXE1 791 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 ZCCHC17Q9NP64 241 aaKnown RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 RBM28Q9NW13 759 aaKnown RBP16.44■□□□□ 0.22
SEC16A-208ENST00000467838 ZBTB1Q9Y2K1 713 aa16.44■□□□□ 0.22
SEC16A-208ENST00000467838 ARHGAP25P42331 645 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 AFMP43652 599 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 KRT31Q15323 416 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 PNKPQ96T60 521 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 TSPYL1Q9H0U9 437 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 TMEM51Q9NW97 253 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 RWDD2AQ9UIY3 292 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 USP21Q9UK80 565 aa16.43■□□□□ 0.22
SEC16A-208ENST00000467838 WNT7AO00755 349 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 ERLIN1O75477 346 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 FGRP09769 529 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 IL6STP40189 918 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-208ENST00000467838 STX17P56962 302 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 ERVK-24P63145 666 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 AMPD2Q01433 879 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
SEC16A-208ENST00000467838 ZNF569Q5MCW4 686 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 HDXQ7Z353 690 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 ENAHQ8N8S7 591 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-208ENST00000467838 NAPGQ99747 312 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-208ENST00000467838 L1RE1Q9UN81 338 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
SEC16A-208ENST00000467838 ATP2B1P20020 1258 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 SLC35F6Q8N357 371 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 ADAM21Q9UKJ8 722 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-208ENST00000467838 CTNND2Q9UQB3 1225 aa16.42■□□□□ 0.22
SEC16A-208ENST00000467838 LAMB1P07942 1786 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 DDAH1O94760 285 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 CAPN2P17655 700 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 CASP1P29466 404 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 RAD51AP2Q09MP3 1159 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 TTC38Q5R3I4 469 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 CYP26C1Q6V0L0 522 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 SMYD4Q8IYR2 804 aaPredicted RBP16.41■□□□□ 0.22
SEC16A-208ENST00000467838 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
SEC16A-208ENST00000467838 BRMS1Q9HCU9 246 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
SEC16A-208ENST00000467838 GTPBP6O43824 516 aaPredicted RBP16.4■□□□□ 0.22
SEC16A-208ENST00000467838 CALM1P0DP23 149 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 CALM2P0DP24 149 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms