RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 HAUS7Q99871 368 aa7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 MKRN2Q9H000 416 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 GBP3Q9H0R5 595 aa7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 LGR6Q9HBX8 967 aa7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 PRDM5Q9NQX1 630 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 PRR13Q9NZ81 148 aa7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 GTF2IRD1Q9UHL9 959 aa7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 PCDHB10Q9UN67 800 aa7.48□□□□□ -1.21
GAPVD1-211ENST00000467707 KIR3DL1P43629 444 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 CPSF6Q16630 551 aaKnown RBP eCLIP7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 LONRF2Q1L5Z9 754 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 ZC3H12BQ5HYM0 836 aaKnown RBP7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 HEATR6Q6AI08 1181 aaKnown RBP7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 OGFOD3Q6PK18 319 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 ZAR1Q86SH2 424 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 JAZF1Q86VZ6 243 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 PPFIBP1Q86W92 1011 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 THAP3Q8WTV1 239 aaPredicted RBP7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 APBA2Q99767 749 aa7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 COL17A1Q9UMD9 1497 aaPredicted RBP7.47□□□□□ -1.21
GAPVD1-211ENST00000467707 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 ENPP3O14638 875 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 GSC2O15499 205 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 EOMESO95936 686 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 FAM87AP0C7U9 286 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 HSD3B2P26439 372 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 RASSF7Q02833 373 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 PRR23CQ6ZRP0 262 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 C22orf34Q6ZV56 151 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 CDH24Q86UP0 819 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 SLC51AQ86UW1 340 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 C7orf61Q8IZ16 206 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 JMYQ8N9B5 988 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 TBC1D32Q96NH3 1257 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 C7orf69Q9H7B7 122 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 WHRNQ9P202 907 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 ZMYM5Q9UJ78 669 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 KCNH3Q9ULD8 1083 aa7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 MRPL42Q9Y6G3 142 aaKnown RBP7.46□□□□□ -1.22
GAPVD1-211ENST00000467707 A0A087WZG4 1122 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 C9IYK1 514 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 PPM1BO75688 479 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 AUHQ13825 339 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 SLC10A6Q3KNW5 377 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 C2orf27AQ580R0 203 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 AXDND1Q5T1B0 1012 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 CRACR2BQ8N4Y2 399 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 METTL22Q9BUU2 404 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 KLHL25Q9H0H3 589 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 PCDHB12Q9Y5F1 795 aa7.45□□□□□ -1.22
GAPVD1-211ENST00000467707 HMX2A2RU54 273 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 CBFA2T2O43439 604 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 TP53P04637 393 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 EPHX1P07099 455 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 ITGA4P13612 1032 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 TDRD10Q5VZ19 366 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 RNF43Q68DV7 783 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 NLGN1Q8N2Q7 840 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 PIWIL2Q8TC59 973 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 SH3TC2Q8TF17 1288 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 GATA6Q92908 595 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 TMX1Q9H3N1 280 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 KDM2BQ8NHM5 1336 aa7.44□□□□□ -1.22
GAPVD1-211ENST00000467707 H2AFB1P0C5Y9 115 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 H2AFB2P0C5Z0 115 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 CD247P20963 164 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 NBPF9Q3BBW0 867 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 SV2CQ496J9 727 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 DUSP27Q5VZP5 1158 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 POMZP3Q6PJE2 187 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 SPATC1Q76KD6 591 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 HOMER1Q86YM7 354 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 SYNPOQ8N3V7 929 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 LILRB2Q8N423 598 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 SLC26A8Q96RN1 970 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 DBNDD2Q9BQY9 259 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 SPATA9Q9BWV2 254 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 SUSD2Q9UGT4 822 aa7.43□□□□□ -1.22
GAPVD1-211ENST00000467707 CCDC163A0A0D9SF12 145 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 NOP56O00567 594 aaKnown RBP7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 ZNF865P0CJ78 1059 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 TAF7LQ5H9L4 462 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 DCAF15Q66K64 600 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 ADAT2Q7Z6V5 191 aaKnown RBP7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 ZSWIM2Q8NEG5 633 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 ENOX1Q8TC92 643 aaKnown RBP7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 APPBP2Q92624 585 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 ZNF512BQ96KM6 892 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 GP6Q9HCN6 339 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms