RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
CCHCR1-211ENST00000467553 BAZ2AQ9UIF9 1905 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 TRIOBPQ9H2D6 2365 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 USP17L12C9JPN9 530 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 USP17L21D6R901 530 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 EVI5LQ96CN4 794 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 PAWRQ96IZ0 340 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 OGDHLQ9ULD0 1010 aa16.84■□□□□ 0.29
CCHCR1-211ENST00000467553 CYP2D7A0A087X1C5 515 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 M0R2C6 588 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 VCAM1P19320 739 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 TMEM179Q6ZVK1 233 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 PLEKHM2Q8IWE5 1019 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 DYNLL2Q96FJ2 89 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 APBA2Q99767 749 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 PAGR1Q9BTK6 254 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 PRO3102Q9H379 93 aa16.83■□□□□ 0.28
CCHCR1-211ENST00000467553 SLC15A5A6NIM6 579 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 GPAA1O43292 621 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 APPP05067 770 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 MAP2K5Q13163 448 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 RILPL2Q969X0 211 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 PORCNQ9H237 461 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 SH2D4AQ9H788 454 aa16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-211ENST00000467553 MYH8P13535 1937 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 GSG1L2A8MUP6 293 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 MPHOSPH10O00566 681 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 HOXC6P09630 235 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 GUCY1A2P33402 732 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 COG2Q14746 738 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 MB21D1Q8N884 522 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 ACER1Q8TDN7 264 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 LPAR1Q92633 364 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 RPAP3Q9H6T3 665 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
CCHCR1-211ENST00000467553 SZT2Q5T011 3432 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 SMIM22K7EJ46 135 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 STRNO43815 780 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 CNMDO75829 334 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 GNAT2P19087 354 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 PTPREP23469 700 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 CACNB2Q08289 660 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 TRIM32Q13049 653 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 SEPT2Q15019 361 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 SLC44A5Q8NCS7 719 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 C11orf49Q9H6J7 331 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 ARHGEF10LQ9HCE6 1279 aa16.8■□□□□ 0.28
CCHCR1-211ENST00000467553 SPDYE16A6NNV3 312 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-211ENST00000467553 MSCO60682 206 aa16.79■□□□□ 0.28
CCHCR1-211ENST00000467553 BMP8BP34820 402 aa16.79■□□□□ 0.28
CCHCR1-211ENST00000467553 CDK8P49336 464 aa16.79■□□□□ 0.28
CCHCR1-211ENST00000467553 MFSD14CQ5VZR4 134 aa16.79■□□□□ 0.28
CCHCR1-211ENST00000467553 OSBPL3Q9H4L5 887 aa16.79■□□□□ 0.28
CCHCR1-211ENST00000467553 TDO2P48775 406 aa16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 GRB14Q14449 540 aa16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 SHCBP1Q8NEM2 672 aa16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
CCHCR1-211ENST00000467553 PEX10O60683 326 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 SBK1Q52WX2 424 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 LHX8Q68G74 356 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 IFNL3Q8IZI9 196 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 DIS3LQ8TF46 1054 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 SLC5A4Q9NY91 659 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 BTBD7Q9P203 1132 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 TMX2Q9Y320 296 aa16.77■□□□□ 0.28
CCHCR1-211ENST00000467553 ZNF236Q9UL36 1845 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 A0A1W2PRG0 241 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 PDE4AP27815 886 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 WDR78Q5VTH9 848 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 C16orf86Q6ZW13 317 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 ABRAQ8N0Z2 381 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 TANGO6Q9C0B7 1094 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 EPB41L4AQ9HCS5 686 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 HELLSQ9NRZ9 838 aa16.76■□□□□ 0.27
CCHCR1-211ENST00000467553 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-211ENST00000467553 COL6A1P12109 1028 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms