RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 ERMP1Q7Z2K6 904 aa8.38□□□□□ -1.07
ATG3-204ENST00000467275 DIRC2Q96SL1 478 aa8.38□□□□□ -1.07
ATG3-204ENST00000467275 PPP1R16BQ96T49 567 aa8.38□□□□□ -1.07
ATG3-204ENST00000467275 KIF2CQ99661 725 aa8.38□□□□□ -1.07
ATG3-204ENST00000467275 ASPNQ9BXN1 380 aa8.38□□□□□ -1.07
ATG3-204ENST00000467275 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
ATG3-204ENST00000467275 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
ATG3-204ENST00000467275 RAP1GAPP47736 663 aa8.37□□□□□ -1.07
ATG3-204ENST00000467275 SYDE1Q6ZW31 735 aaPredicted RBP8.37□□□□□ -1.07
ATG3-204ENST00000467275 GIPC2Q8TF65 315 aa8.37□□□□□ -1.07
ATG3-204ENST00000467275 SUPT16HQ9Y5B9 1047 aaKnown RBP8.37□□□□□ -1.07
ATG3-204ENST00000467275 ROBO2Q9HCK4 1378 aa8.36□□□□□ -1.07
ATG3-204ENST00000467275 KRTAP4-8A0A0G2JLE6 195 aa8.36□□□□□ -1.07
ATG3-204ENST00000467275 DNAJA2O60884 412 aa8.36□□□□□ -1.07
ATG3-204ENST00000467275 HPXP02790 462 aa8.36□□□□□ -1.07
ATG3-204ENST00000467275 CLEC16AQ2KHT3 1053 aa8.36□□□□□ -1.07
ATG3-204ENST00000467275 PCDHA11Q9Y5I1 949 aa8.36□□□□□ -1.07
ATG3-204ENST00000467275 ARSHQ5FYA8 562 aa8.35□□□□□ -1.07
ATG3-204ENST00000467275 FBXO15Q8NCQ5 510 aaPredicted RBP8.35□□□□□ -1.07
ATG3-204ENST00000467275 DHX38Q92620 1227 aaKnown RBP8.35□□□□□ -1.07
ATG3-204ENST00000467275 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
ATG3-204ENST00000467275 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
ATG3-204ENST00000467275 GGT7Q9UJ14 662 aa8.35□□□□□ -1.07
ATG3-204ENST00000467275 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
ATG3-204ENST00000467275 RAG1P15918 1043 aa8.34□□□□□ -1.07
ATG3-204ENST00000467275 TRHRP34981 398 aaPredicted RBP8.34□□□□□ -1.07
ATG3-204ENST00000467275 HS2ST1Q7LGA3 356 aa8.34□□□□□ -1.07
ATG3-204ENST00000467275 OXR1Q8N573 874 aa8.34□□□□□ -1.07
ATG3-204ENST00000467275 PDZD8Q8NEN9 1154 aa8.34□□□□□ -1.07
ATG3-204ENST00000467275 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
ATG3-204ENST00000467275 EPB41L4BQ9H329 900 aa8.34□□□□□ -1.07
ATG3-204ENST00000467275 DCP1AQ9NPI6 582 aaPredicted RBP8.34□□□□□ -1.07
ATG3-204ENST00000467275 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
ATG3-204ENST00000467275 RBM47A0AV96 593 aaKnown RBP8.33□□□□□ -1.08
ATG3-204ENST00000467275 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
ATG3-204ENST00000467275 RGS13O14921 159 aa8.33□□□□□ -1.08
ATG3-204ENST00000467275 GREM1O60565 184 aa8.33□□□□□ -1.08
ATG3-204ENST00000467275 TSPAN15O95858 294 aa8.33□□□□□ -1.08
ATG3-204ENST00000467275 ZGLP1P0C6A0 271 aa8.33□□□□□ -1.08
ATG3-204ENST00000467275 LRRC3Q9BY71 257 aa8.33□□□□□ -1.08
ATG3-204ENST00000467275 SHISA3A0PJX4 238 aa8.32□□□□□ -1.08
ATG3-204ENST00000467275 NFIBO00712 420 aa8.32□□□□□ -1.08
ATG3-204ENST00000467275 RNF4P78317 190 aa8.32□□□□□ -1.08
ATG3-204ENST00000467275 TOX2Q96NM4 488 aa8.32□□□□□ -1.08
ATG3-204ENST00000467275 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
ATG3-204ENST00000467275 GMIPQ9P107 970 aa8.32□□□□□ -1.08
ATG3-204ENST00000467275 FITM1A5D6W6 292 aa8.31□□□□□ -1.08
ATG3-204ENST00000467275 MRPL58Q14197 206 aaKnown RBP8.31□□□□□ -1.08
ATG3-204ENST00000467275 ANKLE2Q86XL3 938 aa8.31□□□□□ -1.08
ATG3-204ENST00000467275 LILRA2Q8N149 483 aa8.31□□□□□ -1.08
ATG3-204ENST00000467275 RNF32Q9H0A6 362 aa8.31□□□□□ -1.08
ATG3-204ENST00000467275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.31□□□□□ -1.08
ATG3-204ENST00000467275 UBOX5O94941 541 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 ATE1O95260 518 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 TMEM253P0C7T8 217 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 CRKP46108 304 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 DUSP4Q13115 394 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
ATG3-204ENST00000467275 SEZ6Q53EL9 994 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 SPPL2CQ8IUH8 684 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
ATG3-204ENST00000467275 C1QTNF9P0C862 333 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 MCM4P33991 863 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 TEKQ02763 1124 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 OVOS1Q6IE37 1185 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 GK5Q6ZS86 529 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 ENOX1Q8TC92 643 aaKnown RBP8.29□□□□□ -1.08
ATG3-204ENST00000467275 SP110Q9HB58 689 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 UBP1Q9NZI7 540 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 ADAMTS1Q9UHI8 967 aa8.29□□□□□ -1.08
ATG3-204ENST00000467275 POLR2BP30876 1174 aaKnown RBP8.28□□□□□ -1.08
ATG3-204ENST00000467275 CHRNEQ04844 493 aa8.28□□□□□ -1.08
ATG3-204ENST00000467275 ZSCAN18Q8TBC5 510 aaPredicted RBP8.28□□□□□ -1.08
ATG3-204ENST00000467275 EHMT1Q9H9B1 1298 aa8.28□□□□□ -1.08
ATG3-204ENST00000467275 SSU72P8A0A1W2PR75 194 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 RPL10P27635 214 aaKnown RBP8.27□□□□□ -1.09
ATG3-204ENST00000467275 CFPP27918 469 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 RAD51AP2Q09MP3 1159 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 NR0B2Q15466 257 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 TIGD5Q53EQ6 642 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 NBPF12Q5TAG4 269 aaPredicted RBP8.27□□□□□ -1.09
ATG3-204ENST00000467275 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 RNF111Q6ZNA4 994 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 ANKS4BQ8N8V4 417 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 TMEM87AQ8NBN3 555 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
ATG3-204ENST00000467275 ATG4CQ96DT6 458 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 SLC26A8Q96RN1 970 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 SLC6A17Q9H1V8 727 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 CNNM2Q9H8M5 875 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 CWC22Q9HCG8 908 aaKnown RBP8.27□□□□□ -1.09
ATG3-204ENST00000467275 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
ATG3-204ENST00000467275 ZNF165P49910 485 aa8.26□□□□□ -1.09
ATG3-204ENST00000467275 CLCQ05315 142 aa8.26□□□□□ -1.09
ATG3-204ENST00000467275 KRTAP19-4Q3LI73 84 aa8.26□□□□□ -1.09
ATG3-204ENST00000467275 SPOCD1Q6ZMY3 1216 aa8.26□□□□□ -1.09
ATG3-204ENST00000467275 NLRC3Q7RTR2 1065 aa8.26□□□□□ -1.09
ATG3-204ENST00000467275 CILP2Q8IUL8 1156 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms