RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 C21orf2O43822 256 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 CUTAO60888 179 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 PHACTR2O75167 634 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 KLRK1P26718 216 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 WTAPQ15007 396 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 SLC4A8Q2Y0W8 1093 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 CCDC12Q8WUD4 166 aaPredicted RBP20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 NACAP1Q9BZK3 213 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 LIFRP42702 1097 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 TUBB2AQ13885 445 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 OXER1Q8TDS5 423 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 TUBB2BQ9BVA1 445 aa20.4■□□□□ 0.86
SNAPC3-205ENST00000467062 IKBKBO14920 756 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 TOP1P11387 765 aaKnown RBP20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 UBASH3AP57075 661 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 DIS3L2Q8IYB7 885 aaKnown RBP20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 RBM28Q9NW13 759 aaKnown RBP20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 EBAG9O00559 213 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 NLRP12P59046 1061 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 RTN1Q16799 776 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 PARP10Q53GL7 1025 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 FOXP4Q8IVH2 680 aaPredicted RBP20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 ZSWIM4Q9H7M6 989 aa20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 GNL3LQ9NVN8 582 aaKnown RBP20.39■□□□□ 0.85
SNAPC3-205ENST00000467062 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 TOB1P50616 345 aaPredicted RBP20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 PPARAQ07869 468 aa20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 NCAPHQ15003 741 aa20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 SLC51AQ86UW1 340 aa20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 CTCFLQ8NI51 663 aaPredicted RBP20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 PNKPQ96T60 521 aa20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 KRT23Q9C075 422 aa20.38■□□□□ 0.85
SNAPC3-205ENST00000467062 MYH7P12883 1935 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 FMNL1O95466 1100 aaPredicted RBP20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 SERPINC1P01008 464 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 VSTM4Q8IW00 320 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 BAG1Q99933 345 aaPredicted RBP20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 FAM169AQ9Y6X4 670 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 MYH15Q9Y2K3 1946 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 KIF3CO14782 793 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 STX10O60499 249 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 RNF40O75150 1001 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 NBPF20Q3BBV1 942 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 TMEM139Q8IV31 216 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 NOSTRINQ8IVI9 506 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 PDILTQ8N807 584 aa20.37■□□□□ 0.85
SNAPC3-205ENST00000467062 MYH3P11055 1940 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 ERICH2A1L162 156 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 FAM205CA6NFA0 338 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 IFNAR1P17181 557 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 FAM98CQ17RN3 349 aaKnown RBP20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 FBXW10Q5XX13 1052 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 UBAC1Q9BSL1 405 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 VIPAS39Q9H9C1 493 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 SUGCTQ9HAC7 445 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 CDC23Q9UJX2 597 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 PCDHB6Q9Y5E3 794 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 MAGEB6P1A0A0J9YX57 407 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 PIP4K2BP78356 416 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 CFAP100Q494V2 611 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 WWC2Q6AWC2 1192 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 SAMD1Q6SPF0 538 aaPredicted RBP20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 ANKRD18AQ8IVF6 992 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 GRAMD1CQ8IYS0 662 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 FANCBQ8NB91 859 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 ZNF384Q8TF68 577 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 TFCP2L1Q9NZI6 479 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 HPSEQ9Y251 543 aa20.36■□□□□ 0.85
SNAPC3-205ENST00000467062 MMP1P03956 469 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 NEDD9Q14511 834 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 PPP2R5AQ15172 486 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 USP49Q70CQ1 688 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 ZNF654Q8IZM8 581 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 CRACR2BQ8N4Y2 399 aaPredicted RBP20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 PUF60Q9UHX1 559 aaKnown RBP20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 KCNH3Q9ULD8 1083 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 INPP5BP32019 993 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 DDR1Q08345 913 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 GRIPAP1Q4V328 841 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 SHISA4Q96DD7 197 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 CABP5Q9NP86 173 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 MINPP1Q9UNW1 487 aa20.35■□□□□ 0.85
SNAPC3-205ENST00000467062 TNKSO95271 1327 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 PPP6R2O75170 966 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 AARSP49588 968 aaKnown RBP eCLIP20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 GOLGA8FQ08AF8 430 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 GOLGA8DPQ0D2H9 430 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 RESP18Q5W5W9 173 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 TRIM22Q8IYM9 498 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 DPF2Q92785 391 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 CABS1Q96KC9 395 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 CDC5LQ99459 802 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms