RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 NEDD1Q8NHV4 660 aa15.59■□□□□ 0.09
UBE4B-206ENST00000466379 CPVLQ9H3G5 476 aa15.59■□□□□ 0.09
UBE4B-206ENST00000466379 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.59■□□□□ 0.09
UBE4B-206ENST00000466379 CUTAO60888 179 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 SYKP43405 635 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 STX1AQ16623 288 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 CCDC178Q5BJE1 867 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 RESP18Q5W5W9 173 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 APOBEC3HQ6NTF7 200 aaKnown RBP15.58■□□□□ 0.08
UBE4B-206ENST00000466379 PODNQ7Z5L7 613 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 KRI1Q8N9T8 703 aaKnown RBP15.58■□□□□ 0.08
UBE4B-206ENST00000466379 TEKT1Q969V4 418 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 CEP95Q96GE4 821 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
UBE4B-206ENST00000466379 CRKP46108 304 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 CACNB3P54284 484 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 NLRP5P59047 1200 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 NFIAQ12857 509 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 CNKSR1Q969H4 720 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 FBXO2Q9UK22 296 aaPredicted RBP15.57■□□□□ 0.08
UBE4B-206ENST00000466379 NT5C2P49902 561 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 CLEC10AQ8IUN9 316 aa15.57■□□□□ 0.08
UBE4B-206ENST00000466379 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.57■□□□□ 0.08
UBE4B-206ENST00000466379 BIN1O00499 593 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 CYTH3O43739 400 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 C21orf2O43822 256 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 ZFPM1Q8IX07 1006 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 C7orf43Q8WVR3 580 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 TNFRSF25Q93038 417 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 BRMS1Q9HCU9 246 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 CCDC39Q9UFE4 941 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 AKR1B1P15121 316 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 EIF6P56537 245 aaKnown RBP15.56■□□□□ 0.08
UBE4B-206ENST00000466379 GABPAQ06546 454 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 DACT2Q5SW24 774 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 HHIPL2Q6UWX4 724 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 KIAA1468Q9P260 1216 aa15.56■□□□□ 0.08
UBE4B-206ENST00000466379 PTPREP23469 700 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 RBM5P52756 815 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBE4B-206ENST00000466379 ZNF174Q15697 407 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 HS1BP3Q53T59 392 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 TYW1BQ6NUM6 668 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 USP17L2Q6R6M4 530 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 OSBPL5Q9H0X9 879 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-206ENST00000466379 ZNF646O15015 1829 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-206ENST00000466379 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
UBE4B-206ENST00000466379 TRIM75PA6NK02 468 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 IQCB1Q15051 598 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 LONRF3Q496Y0 759 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 STRIP1Q5VSL9 837 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 ISM2Q6H9L7 571 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 PIK3AP1Q6ZUJ8 805 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 ANO10Q9NW15 660 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 KCNH3Q9ULD8 1083 aa15.55■□□□□ 0.08
UBE4B-206ENST00000466379 MYH8P13535 1937 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 FAM237AA0A1B0GTK4 181 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 TCP10Q12799 353 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 WWC2Q6AWC2 1192 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 LRRC47Q8N1G4 583 aaKnown RBP15.54■□□□□ 0.08
UBE4B-206ENST00000466379 SPC24Q8NBT2 197 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 RASGRP4Q8TDF6 673 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 ZNF830Q96NB3 372 aaPredicted RBP15.54■□□□□ 0.08
UBE4B-206ENST00000466379 NOL7Q9UMY1 257 aaKnown RBP15.54■□□□□ 0.08
UBE4B-206ENST00000466379 CEP131Q9UPN4 1083 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 KLRF2D3W0D1 207 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 MSNP26038 577 aaKnown RBP15.54■□□□□ 0.08
UBE4B-206ENST00000466379 CLCN1P35523 988 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 GNAQP50148 359 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 PNOCQ13519 176 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 DPCR1Q3MIW9 517 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 USP49Q70CQ1 688 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 HEATR3Q7Z4Q2 680 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 CSRNP2Q9H175 543 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 SERPINB13Q9UIV8 391 aa15.54■□□□□ 0.08
UBE4B-206ENST00000466379 USP17L5A8MUK1 530 aa15.53■□□□□ 0.08
UBE4B-206ENST00000466379 PARP1P09874 1014 aaKnown RBP15.53■□□□□ 0.08
UBE4B-206ENST00000466379 TOP1P11387 765 aaKnown RBP15.53■□□□□ 0.08
UBE4B-206ENST00000466379 SF3B2Q13435 895 aaKnown RBP15.53■□□□□ 0.08
UBE4B-206ENST00000466379 TTC38Q5R3I4 469 aa15.53■□□□□ 0.08
UBE4B-206ENST00000466379 ZDHHC15Q96MV8 337 aa15.53■□□□□ 0.08
UBE4B-206ENST00000466379 TIGD1Q96MW7 591 aa15.53■□□□□ 0.08
UBE4B-206ENST00000466379 SRPRBQ9Y5M8 271 aaKnown RBP15.53■□□□□ 0.08
UBE4B-206ENST00000466379 FRMPD2Q68DX3 1309 aaPredicted RBP15.53■□□□□ 0.08
UBE4B-206ENST00000466379 FAM196BA6NMK8 535 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 FOXN1O15353 648 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 PPIP5K2O43314 1243 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 SHMT1P34896 483 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 BAG6P46379 1132 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 HOMER1Q86YM7 354 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 DHX40Q8IX18 779 aaKnown RBP15.52■□□□□ 0.08
UBE4B-206ENST00000466379 VAT1LQ9HCJ6 419 aa15.52■□□□□ 0.08
UBE4B-206ENST00000466379 YDJCA8MPS7 323 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 KIAA2012Q0VF49 1180 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 KRBA2Q6ZNG9 492 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 METTL16Q86W50 562 aaKnown RBP15.52■□□□□ 0.07
UBE4B-206ENST00000466379 BLIDQ8IZY5 108 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 PDILTQ8N807 584 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 CNNM3Q8NE01 707 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms