RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
CSF3R-208ENST00000466138 TOX2Q96NM4 488 aa13.11□□□□□ -0.31
CSF3R-208ENST00000466138 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
CSF3R-208ENST00000466138 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
CSF3R-208ENST00000466138 MTUS1Q9ULD2 1270 aa13.11□□□□□ -0.31
CSF3R-208ENST00000466138 BRWD1Q9NSI6 2320 aa13.11□□□□□ -0.31
CSF3R-208ENST00000466138 TRANK1O15050 2925 aa13.1□□□□□ -0.31
CSF3R-208ENST00000466138 ITGA6P23229 1130 aa13.1□□□□□ -0.31
CSF3R-208ENST00000466138 CCL23P55773 120 aa13.1□□□□□ -0.31
CSF3R-208ENST00000466138 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
CSF3R-208ENST00000466138 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
CSF3R-208ENST00000466138 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
CSF3R-208ENST00000466138 ZDHHC15Q96MV8 337 aa13.1□□□□□ -0.31
CSF3R-208ENST00000466138 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
CSF3R-208ENST00000466138 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
CSF3R-208ENST00000466138 TRIOO75962 3097 aa13.09□□□□□ -0.31
CSF3R-208ENST00000466138 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
CSF3R-208ENST00000466138 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
CSF3R-208ENST00000466138 CHMP4AQ9BY43 222 aa13.09□□□□□ -0.31
CSF3R-208ENST00000466138 PRKAG3Q9UGI9 489 aa13.09□□□□□ -0.31
CSF3R-208ENST00000466138 ANKRD11Q6UB99 2663 aaPredicted RBP13.09□□□□□ -0.31
CSF3R-208ENST00000466138 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
CSF3R-208ENST00000466138 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
CSF3R-208ENST00000466138 CLUL1Q15846 466 aa13.08□□□□□ -0.32
CSF3R-208ENST00000466138 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
CSF3R-208ENST00000466138 RNF180Q86T96 592 aa13.08□□□□□ -0.32
CSF3R-208ENST00000466138 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
CSF3R-208ENST00000466138 CCDC191Q8NCU4 936 aa13.08□□□□□ -0.32
CSF3R-208ENST00000466138 LENG1Q96BZ8 264 aaPredicted RBP13.08□□□□□ -0.32
CSF3R-208ENST00000466138 DMXL1Q9Y485 3027 aa13.08□□□□□ -0.32
CSF3R-208ENST00000466138 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 PTPREP23469 700 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 ZNF280CQ8ND82 737 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 VTI1AQ96AJ9 217 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 FAM50BQ9Y247 325 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
CSF3R-208ENST00000466138 CACNA1HO95180 2353 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 RFX7Q2KHR2 1363 aa13.07□□□□□ -0.32
CSF3R-208ENST00000466138 CTNND1O60716 968 aaKnown RBP13.06□□□□□ -0.32
CSF3R-208ENST00000466138 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
CSF3R-208ENST00000466138 PDGFBP01127 241 aaPredicted RBP13.06□□□□□ -0.32
CSF3R-208ENST00000466138 ZXDAP98168 799 aa13.06□□□□□ -0.32
CSF3R-208ENST00000466138 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
CSF3R-208ENST00000466138 G2E3Q7L622 706 aa13.06□□□□□ -0.32
CSF3R-208ENST00000466138 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
CSF3R-208ENST00000466138 HINFPQ9BQA5 517 aa13.06□□□□□ -0.32
CSF3R-208ENST00000466138 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 FAM196BA6NMK8 535 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 CYSRT1A8MQ03 144 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 RARBP10826 455 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 TTLL4Q14679 1199 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 RSPO4Q2I0M5 234 aaPredicted RBP13.05□□□□□ -0.32
CSF3R-208ENST00000466138 CDC42EP5Q6NZY7 148 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 ARHGAP45Q92619 1136 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
CSF3R-208ENST00000466138 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
CSF3R-208ENST00000466138 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 USP24Q9UPU5 2620 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 FRAT2O75474 233 aaPredicted RBP13.04□□□□□ -0.32
CSF3R-208ENST00000466138 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
CSF3R-208ENST00000466138 ACLYP53396 1101 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 DLL3Q9NYJ7 618 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 NOB1Q9ULX3 412 aaKnown RBP13.04□□□□□ -0.32
CSF3R-208ENST00000466138 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
CSF3R-208ENST00000466138 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
CSF3R-208ENST00000466138 MTMR2Q13614 643 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 SCLYQ96I15 445 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 VPS13AQ96RL7 3174 aa13.03□□□□□ -0.32
CSF3R-208ENST00000466138 LCHNA4D1U4 455 aa13.02□□□□□ -0.33
CSF3R-208ENST00000466138 HOXC6P09630 235 aa13.02□□□□□ -0.33
CSF3R-208ENST00000466138 RRP1P56182 461 aaKnown RBP13.02□□□□□ -0.33
CSF3R-208ENST00000466138 HIPK3Q9H422 1215 aa13.02□□□□□ -0.33
CSF3R-208ENST00000466138 USP40Q9NVE5 1235 aa13.02□□□□□ -0.33
CSF3R-208ENST00000466138 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.33
CSF3R-208ENST00000466138 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
CSF3R-208ENST00000466138 STXBP3O00186 592 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 FLIIQ13045 1269 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 GRB14Q14449 540 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 DEFB128Q7Z7B8 93 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
CSF3R-208ENST00000466138 POP1Q99575 1024 aaKnown RBP13.01□□□□□ -0.33
CSF3R-208ENST00000466138 SUGCTQ9HAC7 445 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 TNNQ9UQP3 1299 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 PTPRCP08575 1304 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 MROH7Q68CQ1 1323 aa13.01□□□□□ -0.33
CSF3R-208ENST00000466138 FAM208BQ5VWN6 2430 aa13□□□□□ -0.33
CSF3R-208ENST00000466138 KIF16BQ96L93 1317 aa13□□□□□ -0.33
CSF3R-208ENST00000466138 KIF28PB7ZC32 967 aa13□□□□□ -0.33
CSF3R-208ENST00000466138 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms