RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
TOM1-213ENST00000465529 APPP05067 770 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 EEF2P13639 858 aaKnown RBP20.55■□□□□ 0.88
TOM1-213ENST00000465529 RASA1P20936 1047 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 MAPK4P31152 587 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 TDO2P48775 406 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 CCL14Q16627 93 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 SAMD1Q6SPF0 538 aaPredicted RBP20.55■□□□□ 0.88
TOM1-213ENST00000465529 PLEKHH3Q7Z736 793 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 DEFB118Q96PH6 123 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 NUDT12Q9BQG2 462 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 LNPKQ9C0E8 428 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 ZBTB47Q9UFB7 747 aaPredicted RBP20.55■□□□□ 0.88
TOM1-213ENST00000465529 ROBO3Q96MS0 1386 aa20.55■□□□□ 0.88
TOM1-213ENST00000465529 PRDM1O75626 825 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 SGPL1O95470 568 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 IGHDP01880 384 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 HMGCRP04035 888 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 PDE1AP54750 535 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 MORN1Q5T089 497 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 WDR78Q5VTH9 848 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 LBX2Q6XYB7 198 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 CCAR1Q8IX12 1150 aaKnown RBP20.54■□□□□ 0.88
TOM1-213ENST00000465529 IFNL3Q8IZI9 196 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 USP6NLQ92738 828 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.54■□□□□ 0.88
TOM1-213ENST00000465529 VCPKMTQ9H867 229 aa20.54■□□□□ 0.88
TOM1-213ENST00000465529 PAK6Q9NQU5 681 aaPredicted RBP20.54■□□□□ 0.88
TOM1-213ENST00000465529 MYH4Q9Y623 1939 aa20.53■□□□□ 0.88
TOM1-213ENST00000465529 FOXP2O15409 715 aa20.53■□□□□ 0.88
TOM1-213ENST00000465529 UBE2Q1Q7Z7E8 422 aa20.53■□□□□ 0.88
TOM1-213ENST00000465529 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
TOM1-213ENST00000465529 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
TOM1-213ENST00000465529 STAP2Q9UGK3 403 aa20.53■□□□□ 0.88
TOM1-213ENST00000465529 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.88
TOM1-213ENST00000465529 GNAT2P19087 354 aa20.52■□□□□ 0.88
TOM1-213ENST00000465529 COG2Q14746 738 aa20.52■□□□□ 0.88
TOM1-213ENST00000465529 ATG4CQ96DT6 458 aa20.52■□□□□ 0.88
TOM1-213ENST00000465529 MKNK2Q9HBH9 465 aa20.52■□□□□ 0.88
TOM1-213ENST00000465529 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.88
TOM1-213ENST00000465529 RAD21O60216 631 aa20.51■□□□□ 0.87
TOM1-213ENST00000465529 FLOT1O75955 427 aa20.51■□□□□ 0.87
TOM1-213ENST00000465529 DSG3P32926 999 aa20.51■□□□□ 0.87
TOM1-213ENST00000465529 LRRFIP1Q32MZ4 808 aaKnown RBP20.51■□□□□ 0.87
TOM1-213ENST00000465529 LPAR1Q92633 364 aa20.51■□□□□ 0.87
TOM1-213ENST00000465529 MOV10L1Q9BXT6 1211 aaKnown RBP20.51■□□□□ 0.87
TOM1-213ENST00000465529 KANSL2Q9H9L4 492 aa20.51■□□□□ 0.87
TOM1-213ENST00000465529 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
TOM1-213ENST00000465529 SUPT16HQ9Y5B9 1047 aaKnown RBP20.51■□□□□ 0.87
TOM1-213ENST00000465529 FARP2O94887 1054 aaPredicted RBP20.5■□□□□ 0.87
TOM1-213ENST00000465529 TFRCP02786 760 aaKnown RBP20.5■□□□□ 0.87
TOM1-213ENST00000465529 PRKAR2AP13861 404 aaKnown RBP20.5■□□□□ 0.87
TOM1-213ENST00000465529 RGS2P41220 211 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 CCNA1P78396 465 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 VPS53Q5VIR6 699 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 SH2D4AQ9H788 454 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 FLRT1Q9NZU1 646 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 ALPK3Q96L96 1907 aa20.5■□□□□ 0.87
TOM1-213ENST00000465529 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
TOM1-213ENST00000465529 XRCC5P13010 732 aaKnown RBP20.49■□□□□ 0.87
TOM1-213ENST00000465529 ZKSCAN1P17029 563 aaPredicted RBP20.49■□□□□ 0.87
TOM1-213ENST00000465529 PTPREP23469 700 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 MAP2K5Q13163 448 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 FAM83BQ5T0W9 1011 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 DIS3LQ8TF46 1054 aaKnown RBP20.49■□□□□ 0.87
TOM1-213ENST00000465529 EVI5LQ96CN4 794 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 NUP88Q99567 741 aaPredicted RBP20.49■□□□□ 0.87
TOM1-213ENST00000465529 APBA2Q99767 749 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 CRISPLD2Q9H0B8 497 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 NAPBQ9H115 298 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 HOXC10Q9NYD6 342 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 RPTORQ8N122 1335 aa20.49■□□□□ 0.87
TOM1-213ENST00000465529 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 CACNB2Q08289 660 aaPredicted RBP20.48■□□□□ 0.87
TOM1-213ENST00000465529 PLS1Q14651 629 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 MAP3K21Q5TCX8 1036 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 NPLOC4Q8TAT6 608 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 FAM227BQ96M60 508 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 SPATC1LQ9H0A9 340 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 RWDD1Q9H446 243 aaPredicted RBP20.48■□□□□ 0.87
TOM1-213ENST00000465529 HMX1Q9NP08 348 aaPredicted RBP20.48■□□□□ 0.87
TOM1-213ENST00000465529 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 FRMPD3Q5JV73 1810 aa20.48■□□□□ 0.87
TOM1-213ENST00000465529 A0A0D9SFI3 127 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 ERCC3P19447 782 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 CCND3P30281 292 aaPredicted RBP20.47■□□□□ 0.87
TOM1-213ENST00000465529 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
TOM1-213ENST00000465529 PPARAQ07869 468 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 GRB14Q14449 540 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 FAM47AQ5JRC9 791 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 NACAP1Q9BZK3 213 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 TACC3Q9Y6A5 838 aa20.47■□□□□ 0.87
TOM1-213ENST00000465529 ZNF236Q9UL36 1845 aa20.46■□□□□ 0.87
TOM1-213ENST00000465529 SLC15A5A6NIM6 579 aa20.46■□□□□ 0.87
TOM1-213ENST00000465529 CTDSPL2Q05D32 466 aa20.46■□□□□ 0.87
TOM1-213ENST00000465529 AAMPQ13685 434 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms