RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LRP2BPQ9P2M1 347 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 PTPRCP08575 1304 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 A0A1W2PQ45 241 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-214ENST00000465269 A0A1W2PQY0 241 aa18.44■□□□□ 0.54
HDAC6-214ENST00000465269 MCAMP43121 646 aa18.44■□□□□ 0.54
HDAC6-214ENST00000465269 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
HDAC6-214ENST00000465269 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
HDAC6-214ENST00000465269 MICALL1Q8N3F8 863 aa18.44■□□□□ 0.54
HDAC6-214ENST00000465269 COPRSQ9NQ92 184 aa18.44■□□□□ 0.54
HDAC6-214ENST00000465269 XPNPEP3Q9NQH7 507 aa18.44■□□□□ 0.54
HDAC6-214ENST00000465269 ACRP10323 421 aa18.43■□□□□ 0.54
HDAC6-214ENST00000465269 TAL1P17542 331 aaPredicted RBP18.43■□□□□ 0.54
HDAC6-214ENST00000465269 ERCC3P19447 782 aa18.43■□□□□ 0.54
HDAC6-214ENST00000465269 KCNQ1P51787 676 aa18.43■□□□□ 0.54
HDAC6-214ENST00000465269 DYNLL1P63167 89 aaKnown RBP18.43■□□□□ 0.54
HDAC6-214ENST00000465269 NOL10Q9BSC4 688 aaKnown RBP18.43■□□□□ 0.54
HDAC6-214ENST00000465269 LRFN3Q9BTN0 628 aa18.43■□□□□ 0.54
HDAC6-214ENST00000465269 BMP1P13497 986 aa18.42■□□□□ 0.54
HDAC6-214ENST00000465269 TMEM240Q5SV17 173 aa18.42■□□□□ 0.54
HDAC6-214ENST00000465269 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-214ENST00000465269 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
HDAC6-214ENST00000465269 SLC44A5Q8NCS7 719 aa18.42■□□□□ 0.54
HDAC6-214ENST00000465269 ZNF236Q9UL36 1845 aa18.42■□□□□ 0.54
HDAC6-214ENST00000465269 GORABQ5T7V8 394 aa18.41■□□□□ 0.54
HDAC6-214ENST00000465269 C1QTNF1Q9BXJ1 281 aa18.41■□□□□ 0.54
HDAC6-214ENST00000465269 NKX2-4Q9H2Z4 354 aa18.41■□□□□ 0.54
HDAC6-214ENST00000465269 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
HDAC6-214ENST00000465269 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
HDAC6-214ENST00000465269 FOCADQ5VW36 1801 aa18.4■□□□□ 0.54
HDAC6-214ENST00000465269 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
HDAC6-214ENST00000465269 MAML3Q96JK9 1138 aa18.4■□□□□ 0.54
HDAC6-214ENST00000465269 SPATC1LQ9H0A9 340 aa18.4■□□□□ 0.54
HDAC6-214ENST00000465269 KIAA1683Q9H0B3 1180 aa18.4■□□□□ 0.54
HDAC6-214ENST00000465269 SYNGAP1Q96PV0 1343 aa18.4■□□□□ 0.54
HDAC6-214ENST00000465269 BAG3O95817 575 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 TIMP1P01033 207 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 RARBP10826 455 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 CSF2RAP15509 400 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 ARID4AP29374 1257 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-214ENST00000465269 PPP4CP60510 307 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 PLS1Q14651 629 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-214ENST00000465269 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 MEIS3Q99687 375 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
HDAC6-214ENST00000465269 YBX2Q9Y2T7 364 aaKnown RBP18.39■□□□□ 0.53
HDAC6-214ENST00000465269 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
HDAC6-214ENST00000465269 FAM86C2PA6NEL3 165 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 HLA-DOAP06340 250 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 PGK2P07205 417 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 GUCY1A2P33402 732 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 USP14P54578 494 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 KIAA1755Q5JYT7 1200 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 TATDN1Q6P1N9 297 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 NCAPG2Q86XI2 1143 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 KHSRPQ92945 711 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDAC6-214ENST00000465269 CXXC1Q9P0U4 656 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-214ENST00000465269 TBX21Q9UL17 535 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 HCN4Q9Y3Q4 1203 aa18.38■□□□□ 0.53
HDAC6-214ENST00000465269 GBF1Q92538 1859 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 PRRC2BQ5JSZ5 2229 aaKnown RBP18.37■□□□□ 0.53
HDAC6-214ENST00000465269 A0A1W2PRG0 241 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 STRNO43815 780 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 EVX2Q03828 476 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 ABCB5Q2M3G0 1257 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 ANKRD33Q7Z3H0 272 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 RNF180Q86T96 592 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
HDAC6-214ENST00000465269 MYADML2A6NDP7 307 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 DCDC2CA8MYV0 355 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 PLCG2P16885 1265 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 ACLYP53396 1101 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 SEPT2Q15019 361 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 CERKLQ49MI3 558 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-214ENST00000465269 MFSD5Q6N075 450 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 ALYREFQ86V81 257 aaKnown RBP18.36■□□□□ 0.53
HDAC6-214ENST00000465269 MIGA1Q8NAN2 632 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 STARD7Q9NQZ5 370 aa18.36■□□□□ 0.53
HDAC6-214ENST00000465269 MYH1P12882 1939 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 ADAMTS4O75173 837 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 MYOGP15173 224 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 RABGGTBP53611 331 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 COG2Q14746 738 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
HDAC6-214ENST00000465269 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 C11orf16Q9NQ32 467 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 PIH1D3Q9NQM4 214 aaKnown RBP18.35■□□□□ 0.53
HDAC6-214ENST00000465269 WDFY4Q6ZS81 3184 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
HDAC6-214ENST00000465269 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
HDAC6-214ENST00000465269 APBB1O00213 710 aa18.34■□□□□ 0.53
HDAC6-214ENST00000465269 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-214ENST00000465269 ZNF865P0CJ78 1059 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-214ENST00000465269 SHMT1P34896 483 aa18.34■□□□□ 0.53
HDAC6-214ENST00000465269 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.531e-7■■■□□ 17.5
HDAC6-214ENST00000465269 SHCBP1Q8NEM2 672 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms