RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 SALL3Q9BXA9 1300 aa17.9■□□□□ 0.46
MRPL55-225ENST00000465268 GPAA1O43292 621 aa17.89■□□□□ 0.45
MRPL55-225ENST00000465268 EEF2P13639 858 aaKnown RBP17.89■□□□□ 0.45
MRPL55-225ENST00000465268 PRKAR2AP13861 404 aaKnown RBP17.89■□□□□ 0.45
MRPL55-225ENST00000465268 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
MRPL55-225ENST00000465268 SBK1Q52WX2 424 aa17.89■□□□□ 0.45
MRPL55-225ENST00000465268 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.45
MRPL55-225ENST00000465268 PAWRQ96IZ0 340 aaKnown RBP17.89■□□□□ 0.45
MRPL55-225ENST00000465268 CCDC17Q96LX7 622 aa17.89■□□□□ 0.45
MRPL55-225ENST00000465268 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
MRPL55-225ENST00000465268 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
MRPL55-225ENST00000465268 HMX1Q9NP08 348 aaPredicted RBP17.89■□□□□ 0.45
MRPL55-225ENST00000465268 RASA1P20936 1047 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 PTPREP23469 700 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 CCND3P30281 292 aaPredicted RBP17.88■□□□□ 0.45
MRPL55-225ENST00000465268 RGS2P41220 211 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 MAP2K5Q13163 448 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 COG2Q14746 738 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 WDR78Q5VTH9 848 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 NPLOC4Q8TAT6 608 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 ATG4CQ96DT6 458 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 MOV10L1Q9BXT6 1211 aaKnown RBP17.88■□□□□ 0.45
MRPL55-225ENST00000465268 ARPP21Q9UBL0 812 aaPredicted RBP17.88■□□□□ 0.45
MRPL55-225ENST00000465268 TTC41PQ6P2S7 1318 aa17.88■□□□□ 0.45
MRPL55-225ENST00000465268 MINDY4BA8MYZ0 360 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-225ENST00000465268 DSG3P32926 999 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 ATP2B2Q01814 1243 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 ANKRD45Q5TZF3 282 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 AMOTL1Q8IY63 956 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 DDRGK1Q96HY6 314 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 APBA2Q99767 749 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 ARHGEF10LQ9HCE6 1279 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
MRPL55-225ENST00000465268 ZFYP08048 801 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-225ENST00000465268 MX1P20591 662 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 CCNA1P78396 465 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 GRB14Q14449 540 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
MRPL55-225ENST00000465268 LPAR1Q92633 364 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 GCC1Q96CN9 775 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 SPATC1LQ9H0A9 340 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 HOXC10Q9NYD6 342 aa17.86■□□□□ 0.45
MRPL55-225ENST00000465268 SLC15A5A6NIM6 579 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 FOXP2O15409 715 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 PRDM1O75626 825 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 FLOT1O75955 427 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 GLRX3O76003 335 aaKnown RBP17.85■□□□□ 0.45
MRPL55-225ENST00000465268 IGHA2P01877 340 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 ZMYM1Q5SVZ6 1142 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 LHX8Q68G74 356 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 GIMAP6Q6P9H5 292 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 CHRDL2Q6WN34 429 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 CCDC129Q6ZRS4 1044 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 IFNL3Q8IZI9 196 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 HTATIP2Q9BUP3 242 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 KANSL2Q9H9L4 492 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
MRPL55-225ENST00000465268 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 OGDHLQ9ULD0 1010 aa17.85■□□□□ 0.45
MRPL55-225ENST00000465268 RANBP2P49792 3224 aaKnown RBP17.85■□□□□ 0.45
MRPL55-225ENST00000465268 BAZ2AQ9UIF9 1905 aaKnown RBP17.84■□□□□ 0.45
MRPL55-225ENST00000465268 ROBO3Q96MS0 1386 aa17.84■□□□□ 0.45
MRPL55-225ENST00000465268 PATL2C9JE40 543 aaKnown RBP17.84■□□□□ 0.45
MRPL55-225ENST00000465268 ERC2O15083 957 aa17.84■□□□□ 0.45
MRPL55-225ENST00000465268 ERCC3P19447 782 aa17.84■□□□□ 0.45
MRPL55-225ENST00000465268 TMEM132BQ14DG7 1078 aa17.84■□□□□ 0.45
MRPL55-225ENST00000465268 NUP88Q99567 741 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-225ENST00000465268 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
MRPL55-225ENST00000465268 IGKV6D-41A0A0C4DH26 115 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 WDR46O15213 610 aaKnown RBP17.83■□□□□ 0.44
MRPL55-225ENST00000465268 COBLO75128 1261 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 APPP05067 770 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 HOXC6P09630 235 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 CYP2C19P33261 490 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 TDO2P48775 406 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 HDAC1Q13547 482 aaPredicted RBP17.83■□□□□ 0.44
MRPL55-225ENST00000465268 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 TRMT44Q8IYL2 757 aaKnown RBP17.83■□□□□ 0.44
MRPL55-225ENST00000465268 TRPV1Q8NER1 839 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 ADAMTS5Q9UNA0 930 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 TACC3Q9Y6A5 838 aa17.83■□□□□ 0.44
MRPL55-225ENST00000465268 RAD21O60216 631 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 GNAT2P19087 354 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 ADORA2AP29274 412 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 FXR1P51114 621 aaKnown RBP eCLIP17.82■□□□□ 0.44
MRPL55-225ENST00000465268 PLS1Q14651 629 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 NECAB2Q7Z6G3 386 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 SH2D4AQ9H788 454 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
MRPL55-225ENST00000465268 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
MRPL55-225ENST00000465268 PFASO15067 1338 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 PDE1AP54750 535 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 NCAPG2Q86XI2 1143 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 ANKLE1Q8NAG6 615 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 SHCBP1Q8NEM2 672 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 REPS2Q8NFH8 660 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 PRO3102Q9H379 93 aa17.81■□□□□ 0.44
MRPL55-225ENST00000465268 STAP2Q9UGK3 403 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms