RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 GSPT1P15170 499 aaKnown RBP21.16■□□□□ 0.98
COL7A1-205ENST00000465238 GNAT2P19087 354 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 CYP2B6P20813 491 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 GABPAQ06546 454 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 Q3C1V9 767 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 CHRDL2Q6WN34 429 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 TRMT44Q8IYL2 757 aaKnown RBP21.16■□□□□ 0.98
COL7A1-205ENST00000465238 ANKLE1Q8NAG6 615 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 TRIB2Q92519 343 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 SEC62Q99442 399 aaKnown RBP21.16■□□□□ 0.98
COL7A1-205ENST00000465238 DCP1AQ9NPI6 582 aaPredicted RBP21.16■□□□□ 0.98
COL7A1-205ENST00000465238 RABGAP1Q9Y3P9 1069 aa21.16■□□□□ 0.98
COL7A1-205ENST00000465238 VCAM1P19320 739 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 TRIM32Q13049 653 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 CATSPERGQ6ZRH7 1159 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 NECAB2Q7Z6G3 386 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 SKAP1Q86WV1 359 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 ACER1Q8TDN7 264 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 PAWRQ96IZ0 340 aaKnown RBP21.15■□□□□ 0.98
COL7A1-205ENST00000465238 PORCNQ9H237 461 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 DIAPH3Q9NSV4 1193 aa21.15■□□□□ 0.98
COL7A1-205ENST00000465238 APPP05067 770 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 CCNA1P78396 465 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 NMIQ13287 307 aaPredicted RBP21.14■□□□□ 0.97
COL7A1-205ENST00000465238 MCMDC2Q4G0Z9 681 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 MAP3K21Q5TCX8 1036 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 POTEEQ6S8J3 1075 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 PLEKHH3Q7Z736 793 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 AMOTL1Q8IY63 956 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 USP6NLQ92738 828 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 FAM227BQ96M60 508 aa21.14■□□□□ 0.97
COL7A1-205ENST00000465238 BAZ2AQ9UIF9 1905 aaKnown RBP21.14■□□□□ 0.97
COL7A1-205ENST00000465238 EVI5O60447 810 aa21.13■□□□□ 0.97
COL7A1-205ENST00000465238 GUCY1A2P33402 732 aa21.13■□□□□ 0.97
COL7A1-205ENST00000465238 RGS2P41220 211 aa21.13■□□□□ 0.97
COL7A1-205ENST00000465238 MORN1Q5T089 497 aa21.13■□□□□ 0.97
COL7A1-205ENST00000465238 LBX2Q6XYB7 198 aa21.13■□□□□ 0.97
COL7A1-205ENST00000465238 CWC22Q9HCG8 908 aaKnown RBP21.13■□□□□ 0.97
COL7A1-205ENST00000465238 A0A0D9SFI3 127 aa21.12■□□□□ 0.97
COL7A1-205ENST00000465238 PATL2C9JE40 543 aaKnown RBP21.12■□□□□ 0.97
COL7A1-205ENST00000465238 PRKAR2AP13861 404 aaKnown RBP21.12■□□□□ 0.97
COL7A1-205ENST00000465238 ZKSCAN1P17029 563 aaPredicted RBP21.12■□□□□ 0.97
COL7A1-205ENST00000465238 SEPT2Q15019 361 aa21.12■□□□□ 0.97
COL7A1-205ENST00000465238 GIMAP6Q6P9H5 292 aa21.12■□□□□ 0.97
COL7A1-205ENST00000465238 NACAP1Q9BZK3 213 aa21.12■□□□□ 0.97
COL7A1-205ENST00000465238 SWAP70Q9UH65 585 aa21.12■□□□□ 0.97
COL7A1-205ENST00000465238 MYH8P13535 1937 aa21.12■□□□□ 0.97
COL7A1-205ENST00000465238 GSG1L2A8MUP6 293 aa21.11■□□□□ 0.97
COL7A1-205ENST00000465238 MPHOSPH10O00566 681 aaKnown RBP21.11■□□□□ 0.97
COL7A1-205ENST00000465238 CNMDO75829 334 aa21.11■□□□□ 0.97
COL7A1-205ENST00000465238 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
COL7A1-205ENST00000465238 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
COL7A1-205ENST00000465238 CCDC129Q6ZRS4 1044 aa21.11■□□□□ 0.97
COL7A1-205ENST00000465238 APBA2Q99767 749 aa21.11■□□□□ 0.97
COL7A1-205ENST00000465238 RPAP3Q9H6T3 665 aaPredicted RBP21.11■□□□□ 0.97
COL7A1-205ENST00000465238 RBM27Q9P2N5 1060 aaKnown RBP21.11■□□□□ 0.97
COL7A1-205ENST00000465238 USP17L12C9JPN9 530 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 USP17L21D6R901 530 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 EVX2Q03828 476 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 TMEM179Q6ZVK1 233 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 DIS3LQ8TF46 1054 aaKnown RBP21.1■□□□□ 0.97
COL7A1-205ENST00000465238 NBPF3Q9H094 633 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 OGDHLQ9ULD0 1010 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 ALPK3Q96L96 1907 aa21.1■□□□□ 0.97
COL7A1-205ENST00000465238 CYP2D6P10635 497 aa21.09■□□□□ 0.97
COL7A1-205ENST00000465238 TDO2P48775 406 aa21.09■□□□□ 0.97
COL7A1-205ENST00000465238 MAP2K5Q13163 448 aa21.09■□□□□ 0.97
COL7A1-205ENST00000465238 IFNL3Q8IZI9 196 aa21.09■□□□□ 0.97
COL7A1-205ENST00000465238 PRO3102Q9H379 93 aa21.09■□□□□ 0.97
COL7A1-205ENST00000465238 ARPP21Q9UBL0 812 aaPredicted RBP21.09■□□□□ 0.97
COL7A1-205ENST00000465238 A0A1W2PRG0 241 aa21.08■□□□□ 0.97
COL7A1-205ENST00000465238 SPDYE16A6NNV3 312 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-205ENST00000465238 CACNB2Q08289 660 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-205ENST00000465238 CCL14Q16627 93 aa21.08■□□□□ 0.97
COL7A1-205ENST00000465238 BMP2KLQ5H9B9 411 aa21.08■□□□□ 0.97
COL7A1-205ENST00000465238 CTR9Q6PD62 1173 aa21.08■□□□□ 0.97
COL7A1-205ENST00000465238 SLC44A5Q8NCS7 719 aa21.08■□□□□ 0.97
COL7A1-205ENST00000465238 BTBD7Q9P203 1132 aa21.08■□□□□ 0.97
COL7A1-205ENST00000465238 CCDC171Q6TFL3 1326 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 SLC15A5A6NIM6 579 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 PTPREP23469 700 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 MNX1P50219 401 aaPredicted RBP21.07■□□□□ 0.96
COL7A1-205ENST00000465238 COG2Q14746 738 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 SBK1Q52WX2 424 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 C12orf60Q5U649 245 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 WDR78Q5VTH9 848 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 RUFY2Q8WXA3 655 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 DYNLL2Q96FJ2 89 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 NAPBQ9H115 298 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 EPB41L4AQ9HCS5 686 aaPredicted RBP21.07■□□□□ 0.96
COL7A1-205ENST00000465238 HOXC10Q9NYD6 342 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 IVNS1ABPQ9Y6Y0 642 aa21.07■□□□□ 0.96
COL7A1-205ENST00000465238 CYP2D7A0A087X1C5 515 aa21.06■□□□□ 0.96
COL7A1-205ENST00000465238 MINDY4BA8MYZ0 360 aa21.06■□□□□ 0.96
COL7A1-205ENST00000465238 CHMLP26374 656 aa21.06■□□□□ 0.96
COL7A1-205ENST00000465238 ZNF589Q86UQ0 364 aaPredicted RBP21.06■□□□□ 0.96
COL7A1-205ENST00000465238 CCDC17Q96LX7 622 aa21.06■□□□□ 0.96
COL7A1-205ENST00000465238 C11orf49Q9H6J7 331 aa21.06■□□□□ 0.96
COL7A1-205ENST00000465238 SH2D4AQ9H788 454 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms