RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PAPPA2Q9BXP8 1791 aa19.78■□□□□ 0.76
EXOSC3-203ENST00000465229 CCDC69A6NI79 296 aa19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 ECE1P42892 770 aa19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 NOL8Q76FK4 1167 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 ERO1BQ86YB8 467 aa19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 LRRC47Q8N1G4 583 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 SLC10A4Q96EP9 437 aa19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 KAT14Q9H8E8 782 aa19.77■□□□□ 0.76
EXOSC3-203ENST00000465229 KLF18A0A0U1RQI7 1052 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 HUNKP57058 714 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 SPP2Q13103 211 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 SAPCD2Q86UD0 394 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 PNMA1Q8ND90 353 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 ARHGEF10LQ9HCE6 1279 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 TMX2Q9Y320 296 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 TRPM7Q96QT4 1865 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 SPDYE5A6NIY4 337 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 PPATQ06203 517 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 APOA5Q6Q788 366 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 ZNF280CQ8ND82 737 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 AS3MTQ9HBK9 375 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 LIMCH1Q9UPQ0 1083 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 AFG3L2Q9Y4W6 797 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 SLC12A7Q9Y666 1083 aa19.76■□□□□ 0.75
EXOSC3-203ENST00000465229 PDIA3P30101 505 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 TROAPQ12815 778 aa19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 CATIPQ7Z7H3 387 aa19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 ZNF654Q8IZM8 581 aa19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 ZNF274Q96GC6 653 aaPredicted RBP19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 SYNPO2Q9UMS6 1093 aa19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 DOCK1Q14185 1865 aa19.75■□□□□ 0.75
EXOSC3-203ENST00000465229 OTOFQ9HC10 1997 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 TMEM88BA6NKF7 163 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 USP17L10C9JJH3 530 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 OTUD5Q96G74 571 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 MYL10Q9BUA6 226 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 KIAA1683Q9H0B3 1180 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 NAP1L2Q9ULW6 460 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 HPS5Q9UPZ3 1129 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 TLL2Q9Y6L7 1015 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 ATAD5Q96QE3 1844 aa19.74■□□□□ 0.75
EXOSC3-203ENST00000465229 TRIM75PA6NK02 468 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 F5H6K3 240 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 BACE1P56817 501 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 KLRC3Q07444 240 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 ME3Q16798 604 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 SYNE3Q6ZMZ3 975 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 RAB11FIP4Q86YS3 637 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 OPTNQ96CV9 577 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 SH2D4AQ9H788 454 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 IRF6O14896 467 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 ZBTB43O43298 467 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 LARGE1O95461 756 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 RXRAP19793 462 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 GJA5P36382 358 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 PPIL2Q13356 520 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 MTMR2Q13614 643 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 KIAA1755Q5JYT7 1200 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 GMCL1P1Q8NEA9 526 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 FEZ1Q99689 392 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 VCPKMTQ9H867 229 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 MTMR7Q9Y216 660 aa19.73■□□□□ 0.75
EXOSC3-203ENST00000465229 GOLGA8BA8MQT2 603 aa19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 DDAH1O94760 285 aa19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 ZYXQ15942 572 aaKnown RBP19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 RASGRP2Q7LDG7 609 aa19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 MICU3Q86XE3 530 aa19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 NUP133Q8WUM0 1156 aa19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 CHMP4CQ96CF2 233 aa19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 SH2B1Q9NRF2 756 aaPredicted RBP19.72■□□□□ 0.75
EXOSC3-203ENST00000465229 GOLGA6L22H0YM25 854 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 RAD21O60216 631 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 NDUFB10O96000 172 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 SNHG28P0DPA3 235 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 PDHBP11177 359 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 RCAN1P53805 252 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 STK3Q13188 491 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 SKOR2Q2VWA4 1001 aaPredicted RBP19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 SLFN13Q68D06 897 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 FANCBQ8NB91 859 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 GOPCQ9HD26 462 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 KCNH4Q9UQ05 1017 aa19.71■□□□□ 0.75
EXOSC3-203ENST00000465229 C19orf81C9J6K1 198 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 CXCL11O14625 94 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 PFKFB2O60825 505 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 CALM1P0DP23 149 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 CALM2P0DP24 149 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 CALM3P0DP25 149 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 APLP1P51693 650 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 DGKZQ13574 1117 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 SPICE1Q8N0Z3 855 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 WNK4Q96J92 1243 aa19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 ABT1Q9ULW3 272 aaKnown RBP19.7■□□□□ 0.74
EXOSC3-203ENST00000465229 TRAK2O60296 914 aa19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 BAG4O95429 457 aaKnown RBP19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 METAP2P50579 478 aaKnown RBP eCLIP19.69■□□□□ 0.74
EXOSC3-203ENST00000465229 ZNF157P51786 506 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms