RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 BTBD7Q9P203 1132 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 GSG1L2A8MUP6 293 aa24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 ERC2O15083 957 aa24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 ICA1Q05084 483 aa24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 LRRFIP1Q32MZ4 808 aaKnown RBP24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 TSHZ3Q63HK5 1081 aa24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 ANKLE1Q8NAG6 615 aa24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 ROBO3Q96MS0 1386 aa24.66■■□□□ 1.54
PDLIM4-205ENST00000463615 RLFQ13129 1914 aa24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 GLRX3O76003 335 aaKnown RBP24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 TFRCP02786 760 aaKnown RBP24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 TRIM32Q13049 653 aa24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 KIAA1755Q5JYT7 1200 aa24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 APBA2Q99767 749 aa24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 VCPKMTQ9H867 229 aa24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 KANSL2Q9H9L4 492 aa24.65■■□□□ 1.54
PDLIM4-205ENST00000463615 SALL3Q9BXA9 1300 aa24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 A0A0G2JMZ2 1700 aa24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 SLC15A5A6NIM6 579 aa24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 GNAT2P19087 354 aa24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 MAP2K5Q13163 448 aa24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 HABP4Q5JVS0 413 aaKnown RBP24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 MB21D1Q8N884 522 aa24.64■■□□□ 1.54
PDLIM4-205ENST00000463615 H0YGN5 161 aa24.63■■□□□ 1.53
PDLIM4-205ENST00000463615 HOXC6P09630 235 aa24.63■■□□□ 1.53
PDLIM4-205ENST00000463615 ZKSCAN1P17029 563 aaPredicted RBP24.63■■□□□ 1.53
PDLIM4-205ENST00000463615 PTPREP23469 700 aa24.63■■□□□ 1.53
PDLIM4-205ENST00000463615 WDR46O15213 610 aaKnown RBP24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 GPAA1O43292 621 aa24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 PRKAR2AP13861 404 aaKnown RBP24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 DSG3P32926 999 aa24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 GRB14Q14449 540 aa24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 SHCBP1Q8NEM2 672 aa24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 OGDHLQ9ULD0 1010 aa24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 GREB1LQ9C091 1923 aaPredicted RBP24.62■■□□□ 1.53
PDLIM4-205ENST00000463615 IGHA2P01877 340 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 MX1P20591 662 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 HDAC1Q13547 482 aaPredicted RBP24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 AAMPQ13685 434 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 CLEC10AQ8IUN9 316 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 OTUD7AQ8TE49 926 aaPredicted RBP24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 DPF3Q92784 378 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 CRBNQ96SW2 442 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 TANGO6Q9C0B7 1094 aa24.61■■□□□ 1.53
PDLIM4-205ENST00000463615 EEF2P13639 858 aaKnown RBP24.6■■□□□ 1.53
PDLIM4-205ENST00000463615 RASA1P20936 1047 aa24.6■■□□□ 1.53
PDLIM4-205ENST00000463615 CACNB2Q08289 660 aaPredicted RBP24.6■■□□□ 1.53
PDLIM4-205ENST00000463615 EPB41L4AQ9HCS5 686 aaPredicted RBP24.6■■□□□ 1.53
PDLIM4-205ENST00000463615 ADAMTS5Q9UNA0 930 aa24.6■■□□□ 1.53
PDLIM4-205ENST00000463615 ZNF236Q9UL36 1845 aa24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 M0R2C6 588 aa24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 STRNO43815 780 aa24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 MNX1P50219 401 aaPredicted RBP24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 CCL14Q16627 93 aa24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 MOV10L1Q9BXT6 1211 aaKnown RBP24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 SPATC1LQ9H0A9 340 aa24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 CWC22Q9HCG8 908 aaKnown RBP24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 IVNS1ABPQ9Y6Y0 642 aa24.59■■□□□ 1.53
PDLIM4-205ENST00000463615 PATL2C9JE40 543 aaKnown RBP24.58■■□□□ 1.53
PDLIM4-205ENST00000463615 ZMYM1Q5SVZ6 1142 aa24.58■■□□□ 1.53
PDLIM4-205ENST00000463615 NECAB2Q7Z6G3 386 aa24.58■■□□□ 1.53
PDLIM4-205ENST00000463615 PAWRQ96IZ0 340 aaKnown RBP24.58■■□□□ 1.53
PDLIM4-205ENST00000463615 STAP2Q9UGK3 403 aa24.58■■□□□ 1.53
PDLIM4-205ENST00000463615 NR2E3Q9Y5X4 410 aa24.58■■□□□ 1.53
PDLIM4-205ENST00000463615 PARP14Q460N5 1801 aa24.57■■□□□ 1.52
PDLIM4-205ENST00000463615 FLOT1O75955 427 aa24.57■■□□□ 1.52
PDLIM4-205ENST00000463615 SPICE1Q8N0Z3 855 aa24.57■■□□□ 1.52
PDLIM4-205ENST00000463615 NYAP2Q9P242 653 aa24.57■■□□□ 1.52
PDLIM4-205ENST00000463615 LHX8Q68G74 356 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 TICAM2Q86XR7 235 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 IFNL3Q8IZI9 196 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 ABRAQ8N0Z2 381 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 MROH8Q9H579 483 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 MKNK2Q9HBH9 465 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 ZNF287Q9HBT7 754 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 GOPCQ9HD26 462 aa24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 COLQQ9Y215 455 aaPredicted RBP24.56■■□□□ 1.52
PDLIM4-205ENST00000463615 IGKV6D-41A0A0C4DH26 115 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 MINDY4BA8MYZ0 360 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 WDR78Q5VTH9 848 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 MFSD14CQ5VZR4 134 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 DIS3LQ8TF46 1054 aaKnown RBP24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 ATG4CQ96DT6 458 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 FSD1Q9BTV5 496 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 NBPF3Q9H094 633 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 FLRT1Q9NZU1 646 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 SYNPO2Q9UMS6 1093 aa24.55■■□□□ 1.52
PDLIM4-205ENST00000463615 ERCC3P19447 782 aa24.54■■□□□ 1.52
PDLIM4-205ENST00000463615 TDO2P48775 406 aa24.54■■□□□ 1.52
PDLIM4-205ENST00000463615 ANKRD45Q5TZF3 282 aa24.54■■□□□ 1.52
PDLIM4-205ENST00000463615 NPLOC4Q8TAT6 608 aa24.54■■□□□ 1.52
PDLIM4-205ENST00000463615 NACAP1Q9BZK3 213 aa24.54■■□□□ 1.52
PDLIM4-205ENST00000463615 PRO3102Q9H379 93 aa24.54■■□□□ 1.52
PDLIM4-205ENST00000463615 CCND3P30281 292 aaPredicted RBP24.53■■□□□ 1.52
PDLIM4-205ENST00000463615 OLFML2BQ68BL8 750 aa24.53■■□□□ 1.52
PDLIM4-205ENST00000463615 SEC62Q99442 399 aaKnown RBP24.53■■□□□ 1.52
PDLIM4-205ENST00000463615 ZBTB47Q9UFB7 747 aaPredicted RBP24.53■■□□□ 1.52
PDLIM4-205ENST00000463615 PPP1R9AQ9ULJ8 1098 aa24.53■■□□□ 1.52
PDLIM4-205ENST00000463615 PLIN4Q96Q06 1357 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms