RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 RBPJLQ9UBG7 517 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 ZSWIM8A7E2V4 1837 aa20.99■□□□□ 0.95
VPS52-214ENST00000463486 PEX10O60683 326 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 TSPY3P0CV98 308 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 TSPY8P0CW00 308 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 SMCR8Q8TEV9 937 aaPredicted RBP20.98■□□□□ 0.95
VPS52-214ENST00000463486 LPAR1Q92633 364 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 TXNRD2Q9NNW7 524 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 MORF4L1Q9UBU8 362 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 RLFQ13129 1914 aa20.98■□□□□ 0.95
VPS52-214ENST00000463486 ZNF213O14771 459 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 NMT2O60551 498 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 GCLCP48506 637 aaPredicted RBP20.97■□□□□ 0.95
VPS52-214ENST00000463486 IRX3P78415 501 aaPredicted RBP20.97■□□□□ 0.95
VPS52-214ENST00000463486 SPICE1Q8N0Z3 855 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 ANKRD13CQ8N6S4 541 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 MAP4K1Q92918 833 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 TRIM47Q96LD4 638 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 ESYT1Q9BSJ8 1104 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 SH2D4AQ9H788 454 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 CLIP2Q9UDT6 1046 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 LAMA4Q16363 1823 aa20.97■□□□□ 0.95
VPS52-214ENST00000463486 CNMDO75829 334 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 PCP11498 1178 aaKnown RBP20.96■□□□□ 0.95
VPS52-214ENST00000463486 ATP2B2Q01814 1243 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 FAM110CQ1W6H9 321 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 LBX2Q6XYB7 198 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 LSG1Q9H089 658 aaKnown RBP20.96■□□□□ 0.95
VPS52-214ENST00000463486 EFCC1Q9HA90 598 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 CTNNA3Q9UI47 895 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 SYNPO2Q9UMS6 1093 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 TRIM17Q9Y577 477 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 NEDD4P46934 1319 aa20.96■□□□□ 0.95
VPS52-214ENST00000463486 F5H6K3 240 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 RANBP6O60518 1105 aaKnown RBP20.95■□□□□ 0.94
VPS52-214ENST00000463486 TTLL1O95922 423 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 KLRC3Q07444 240 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 PKN2Q16513 984 aaKnown RBP20.95■□□□□ 0.94
VPS52-214ENST00000463486 Q3C1V9 767 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 MFSD6Q6ZSS7 791 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 TCP11L1Q9NUJ3 509 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 TAF6LQ9Y6J9 622 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 CENPFP49454 3210 aa20.95■□□□□ 0.94
VPS52-214ENST00000463486 TSPY2A6NKD2 308 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 SPDYE16A6NNV3 312 aaPredicted RBP20.94■□□□□ 0.94
VPS52-214ENST00000463486 WDR46O15213 610 aaKnown RBP20.94■□□□□ 0.94
VPS52-214ENST00000463486 NDUFB10O96000 172 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 CYP21A2P08686 494 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 PSMC4P43686 418 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 IMMTQ16891 758 aaKnown RBP20.94■□□□□ 0.94
VPS52-214ENST00000463486 RCSD1Q6JBY9 416 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 ABHD8Q96I13 439 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 PTPN22Q9Y2R2 807 aa20.94■□□□□ 0.94
VPS52-214ENST00000463486 COG2Q14746 738 aa20.93■□□□□ 0.94
VPS52-214ENST00000463486 FBXO46Q6PJ61 603 aaPredicted RBP20.93■□□□□ 0.94
VPS52-214ENST00000463486 GMCL1P1Q8NEA9 526 aa20.93■□□□□ 0.94
VPS52-214ENST00000463486 RNF41Q9H4P4 317 aaPredicted RBP20.93■□□□□ 0.94
VPS52-214ENST00000463486 GOPCQ9HD26 462 aa20.93■□□□□ 0.94
VPS52-214ENST00000463486 RRP12Q5JTH9 1297 aaKnown RBP20.92■□□□□ 0.94
VPS52-214ENST00000463486 LRRC47Q8N1G4 583 aaKnown RBP20.92■□□□□ 0.94
VPS52-214ENST00000463486 NUP88Q99567 741 aaPredicted RBP20.92■□□□□ 0.94
VPS52-214ENST00000463486 BTBD7Q9P203 1132 aa20.92■□□□□ 0.94
VPS52-214ENST00000463486 ADAMTS5Q9UNA0 930 aa20.92■□□□□ 0.94
VPS52-214ENST00000463486 RABGAP1Q9Y3P9 1069 aa20.92■□□□□ 0.94
VPS52-214ENST00000463486 U3KPZ7 1027 aaPredicted RBP20.92■□□□□ 0.94
VPS52-214ENST00000463486 MYH4Q9Y623 1939 aa20.92■□□□□ 0.94
VPS52-214ENST00000463486 CDC45O75419 566 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 ECM2O94769 699 aaPredicted RBP20.91■□□□□ 0.94
VPS52-214ENST00000463486 GNRH1P01148 92 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 DSG3P32926 999 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 FAM83BQ5T0W9 1011 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 GPRC5AQ8NFJ5 357 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 GTF3C2Q8WUA4 911 aaPredicted RBP20.91■□□□□ 0.94
VPS52-214ENST00000463486 TANGO6Q9C0B7 1094 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 TOMM22Q9NS69 142 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 FBXO28Q9NVF7 368 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 HOXC10Q9NYD6 342 aa20.91■□□□□ 0.94
VPS52-214ENST00000463486 PARP14Q460N5 1801 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 NT5C2P49902 561 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 ERVK-9P63128 1117 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 ERVK-24P63145 666 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 KIF22Q14807 665 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 ESR2Q92731 530 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 ZSWIM5Q9P217 1185 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 SRRDQ9UH36 339 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 STX8Q9UNK0 236 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 HPS5Q9UPZ3 1129 aa20.9■□□□□ 0.94
VPS52-214ENST00000463486 RBM8AQ9Y5S9 174 aaKnown RBP20.9■□□□□ 0.94
VPS52-214ENST00000463486 DOCK3Q8IZD9 2030 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 MYPNQ86TC9 1320 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 B4E1Z4 1266 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 KDM4AO75164 1064 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 FMNL1O95466 1100 aaPredicted RBP20.89■□□□□ 0.93
VPS52-214ENST00000463486 FCGRTP55899 365 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 ARHGEF6Q15052 776 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 PPP4R3BQ5MIZ7 849 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 STOX1Q6ZVD7 989 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 ATG4CQ96DT6 458 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 TMEM47Q9BQJ4 181 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 PORCNQ9H237 461 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms