RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 CYP2C18P33260 490 aa16.76■□□□□ 0.27
C9orf3-211ENST00000463372 ID4P47928 161 aa16.76■□□□□ 0.27
C9orf3-211ENST00000463372 FKBP5Q13451 457 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-211ENST00000463372 PTCRAQ6ISU1 281 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-211ENST00000463372 TECTAO75443 2155 aa16.76■□□□□ 0.27
C9orf3-211ENST00000463372 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-211ENST00000463372 CHD8Q9HCK8 2581 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 MOXD2PA6NHM9 499 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 TLR3O15455 904 aaKnown RBP16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 GRB10Q13322 594 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 IER5LQ5T953 404 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 USP17L2Q6R6M4 530 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 SLF2Q8IX21 1173 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-211ENST00000463372 FAM86C1Q9NVL1 165 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 CDK5RAP2Q96SN8 1893 aa16.75■□□□□ 0.27
C9orf3-211ENST00000463372 KCNA5P22460 613 aa16.74■□□□□ 0.27
C9orf3-211ENST00000463372 TCF15Q12870 199 aa16.74■□□□□ 0.27
C9orf3-211ENST00000463372 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
C9orf3-211ENST00000463372 VTI1AQ96AJ9 217 aa16.74■□□□□ 0.27
C9orf3-211ENST00000463372 GLT1D1Q96MS3 346 aa16.74■□□□□ 0.27
C9orf3-211ENST00000463372 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
C9orf3-211ENST00000463372 NRBP1Q9UHY1 535 aa16.74■□□□□ 0.27
C9orf3-211ENST00000463372 HERC5Q9UII4 1024 aaKnown RBP16.74■□□□□ 0.27
C9orf3-211ENST00000463372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-211ENST00000463372 BTDP43251 543 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
C9orf3-211ENST00000463372 FLIIQ13045 1269 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 PUS10Q3MIT2 529 aaKnown RBP16.73■□□□□ 0.27
C9orf3-211ENST00000463372 LRRC24Q50LG9 513 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
C9orf3-211ENST00000463372 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 VGLL2Q8N8G2 317 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
C9orf3-211ENST00000463372 IRF2BPLQ9H1B7 796 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 BTBD7Q9P203 1132 aa16.73■□□□□ 0.27
C9orf3-211ENST00000463372 ELP1O95163 1332 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 GRXCR2A6NFK2 248 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 COBLO75128 1261 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
C9orf3-211ENST00000463372 RGS20O76081 388 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 CDK7P50613 346 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 PKN1Q16512 942 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 RPUSD2Q8IZ73 545 aaKnown RBP16.72■□□□□ 0.27
C9orf3-211ENST00000463372 ATOH1Q92858 354 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-211ENST00000463372 LMCD1Q9NZU5 365 aa16.72■□□□□ 0.27
C9orf3-211ENST00000463372 SALL1Q9NSC2 1324 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 PLXNA3P51805 1871 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 GRM8O00222 908 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 KCNA10Q16322 511 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 LBX2Q6XYB7 198 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 ZGPATQ8N5A5 531 aaKnown RBP16.71■□□□□ 0.27
C9orf3-211ENST00000463372 MAML3Q96JK9 1138 aa16.71■□□□□ 0.27
C9orf3-211ENST00000463372 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
C9orf3-211ENST00000463372 KMT2EQ8IZD2 1858 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 ARVCFO00192 962 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 AKR1A1P14550 325 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 TAP1Q03518 808 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 CATSPERGQ6ZRH7 1159 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 SUGP1Q8IWZ8 645 aaKnown RBP16.7■□□□□ 0.26
C9orf3-211ENST00000463372 FAM126BQ8IXS8 530 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
C9orf3-211ENST00000463372 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-211ENST00000463372 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
C9orf3-211ENST00000463372 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-211ENST00000463372 FGFR2P21802 821 aa16.69■□□□□ 0.26
C9orf3-211ENST00000463372 GINM1Q9NU53 330 aa16.69■□□□□ 0.26
C9orf3-211ENST00000463372 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
C9orf3-211ENST00000463372 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
C9orf3-211ENST00000463372 ATRXP46100 2492 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 LPXNO60711 386 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 CCL23P55773 120 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 ZYXQ15942 572 aaKnown RBP16.68■□□□□ 0.26
C9orf3-211ENST00000463372 PBXIP1Q96AQ6 731 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 LENG1Q96BZ8 264 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-211ENST00000463372 FAM163AQ96GL9 167 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-211ENST00000463372 FEZ1Q99689 392 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 MOV10L1Q9BXT6 1211 aaKnown RBP16.68■□□□□ 0.26
C9orf3-211ENST00000463372 PRKAG3Q9UGI9 489 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 SYNRGQ9UMZ2 1314 aa16.68■□□□□ 0.26
C9orf3-211ENST00000463372 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 ZP2Q05996 745 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 BMP8AQ7Z5Y6 402 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 PCSK9Q8NBP7 692 aaKnown RBP16.67■□□□□ 0.26
C9orf3-211ENST00000463372 LPIN2Q92539 896 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
C9orf3-211ENST00000463372 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms