RNA–Protein interactions for RNA: ENST00000463068.1

TM4SF4-202, Transcript of transmembrane 4 L six family member 4, humanhuman

TSL 2

Gene TM4SF4, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-202ENST00000463068 Q3C1V9 767 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 ARMC5Q96C12 935 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 VCPKMTQ9H867 229 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 ZMYM6O95789 1325 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
TM4SF4-202ENST00000463068 FGRP09769 529 aa16.12■□□□□ 0.17
TM4SF4-202ENST00000463068 FCGRTP55899 365 aa16.12■□□□□ 0.17
TM4SF4-202ENST00000463068 SOX10P56693 466 aa16.12■□□□□ 0.17
TM4SF4-202ENST00000463068 PRKCZQ05513 592 aa16.12■□□□□ 0.17
TM4SF4-202ENST00000463068 LBX2Q6XYB7 198 aa16.12■□□□□ 0.17
TM4SF4-202ENST00000463068 NKX2-3Q8TAU0 364 aa16.12■□□□□ 0.17
TM4SF4-202ENST00000463068 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 TNRC18O15417 2968 aaPredicted RBP16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 RGS19P49795 217 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 PRMT2P55345 433 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 FAM47AQ5JRC9 791 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 SPICE1Q8N0Z3 855 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 BTBD7Q9P203 1132 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 NYAP2Q9P242 653 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 MYPNQ86TC9 1320 aa16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 KIAA0100Q14667 2235 aaKnown RBP16.11■□□□□ 0.17
TM4SF4-202ENST00000463068 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 ERVK-9P63128 1117 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 ERVK-24P63145 666 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 PDE4BQ07343 736 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 SH3TC2Q8TF17 1288 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 LPAR1Q92633 364 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 ZNF333Q96JL9 665 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 PAGR1Q9BTK6 254 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 PORCNQ9H237 461 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 MTMR4Q9NYA4 1195 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 GJD2Q9UKL4 321 aa16.1■□□□□ 0.17
TM4SF4-202ENST00000463068 HIP1O00291 1037 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 ORC4O43929 436 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 HOXD10P28358 340 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 FLT3LGP49771 235 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 TFAP4Q01664 338 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 MKL1Q969V6 931 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 SH2D4AQ9H788 454 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 ZNF287Q9HBT7 754 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
TM4SF4-202ENST00000463068 WDR46O15213 610 aaKnown RBP16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 CHMLP26374 656 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 DSG3P32926 999 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 HAND2P61296 217 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 COG2Q14746 738 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 SLC9C1Q4G0N8 1177 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 GTF3C2Q8WUA4 911 aaPredicted RBP16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 TANGO6Q9C0B7 1094 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
TM4SF4-202ENST00000463068 POTEFA5A3E0 1075 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 NMT2O60551 498 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 NOVP48745 357 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 IRF5Q13568 498 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 RAET1EQ8TD07 263 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 NUP88Q99567 741 aaPredicted RBP16.07■□□□□ 0.16
TM4SF4-202ENST00000463068 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 F5H6K3 240 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 NDUFB10O96000 172 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 GRK4P32298 578 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 KLRC3Q07444 240 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 FAM83BQ5T0W9 1011 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 USP6NLQ92738 828 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 COA7Q96BR5 231 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
TM4SF4-202ENST00000463068 MKI67P46013 3256 aaKnown RBP16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 ADCY3O60266 1144 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 FLOT1O75955 427 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 TTLL1O95922 423 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 ELNP15502 786 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 MTFR1Q15390 333 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
TM4SF4-202ENST00000463068 NEDD4P46934 1319 aa16.04■□□□□ 0.16
TM4SF4-202ENST00000463068 RAD50Q92878 1312 aa16.04■□□□□ 0.16
TM4SF4-202ENST00000463068 ZNF236Q9UL36 1845 aa16.04■□□□□ 0.16
TM4SF4-202ENST00000463068 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms