RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 LRRD1A4D1F6 860 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 ZNF131P52739 623 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
SMC4-204ENST00000462787 NECTIN1Q15223 517 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 CCDC62Q6P9F0 684 aa17.52■□□□□ 0.4
SMC4-204ENST00000462787 KCNJ6P48051 423 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 MIGA1Q8NAN2 632 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 ANKIB1Q9P2G1 1089 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 RNF14Q9UBS8 474 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.52■□□□□ 0.395e-47■■■■■ 274.1
SMC4-204ENST00000462787 DISP1Q96F81 1524 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 SPOPO43791 374 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 GUCY2DQ02846 1103 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 MUM1Q2TAK8 710 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 LETM2Q2VYF4 491 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.39
SMC4-204ENST00000462787 SOWAHDA6NJG2 315 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
SMC4-204ENST00000462787 DDIT3P35638 169 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 PPP4R3AQ6IN85 833 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 SERPINA10Q9UK55 444 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 NCOA3Q9Y6Q9 1424 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 FAM169AQ9Y6X4 670 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 KDRP35968 1356 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 CCDC169A6NNP5 214 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 ENC1O14682 589 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
SMC4-204ENST00000462787 EEF2P13639 858 aaKnown RBP17.5■□□□□ 0.39
SMC4-204ENST00000462787 FERP16591 822 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 PPP2R5AQ15172 486 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 FAM13AO94988 1023 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 PLCB3Q01970 1234 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 FERMT1Q9BQL6 677 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 MYOM2P54296 1465 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 STX2P32856 288 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 NNTQ13423 1086 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 SH2D4BQ5SQS7 431 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 NFATC2IPQ8NCF5 419 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 IP6K1Q92551 441 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 DNAI2Q9GZS0 605 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 ZCCHC17Q9NP64 241 aaKnown RBP17.5■□□□□ 0.39
SMC4-204ENST00000462787 TNNI2P48788 182 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
SMC4-204ENST00000462787 FTOQ9C0B1 505 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMC4-204ENST00000462787 KRIT1O00522 736 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 KCNK3O14649 394 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
SMC4-204ENST00000462787 PPARDQ03181 441 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 TRAF1Q13077 416 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 E2F5Q15329 346 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 ZKSCAN8Q15776 578 aaPredicted RBP17.49■□□□□ 0.39
SMC4-204ENST00000462787 HHATQ5VTY9 493 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 PHLDB3Q6NSJ2 640 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 EMBQ6PCB8 327 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 MAN1B1Q9UKM7 699 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 AMFRQ9UKV5 643 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 CYP21A2P08686 494 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
SMC4-204ENST00000462787 ZNF365Q70YC5 407 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 NOL3O60936 208 aaKnown RBP17.49■□□□□ 0.39
SMC4-204ENST00000462787 GNA14O95837 355 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 PGBD1Q96JS3 809 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 TADA3O75528 432 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 TRIM68Q6AZZ1 485 aa17.49■□□□□ 0.39
SMC4-204ENST00000462787 ATP1A3P13637 1013 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 EEF1GP26641 437 aaKnown RBP17.48■□□□□ 0.39
SMC4-204ENST00000462787 KIF23Q02241 960 aaPredicted RBP17.48■□□□□ 0.39
SMC4-204ENST00000462787 ACRBPQ8NEB7 543 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 NCAPGQ9BPX3 1015 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 FRMD3A2A2Y4 597 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 HGSO14964 777 aaPredicted RBP17.48■□□□□ 0.39
SMC4-204ENST00000462787 ZMYND10O75800 440 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 ASIC3Q9UHC3 531 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 CALUO43852 315 aaPredicted RBP17.48■□□□□ 0.39
SMC4-204ENST00000462787 SUN1O94901 812 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 ERCC3P19447 782 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 CABP7Q86V35 215 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 AATKQ6ZMQ8 1374 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 UHRF1BP1LA0JNW5 1464 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 SLMAPQ14BN4 828 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 REREQ9P2R6 1566 aa17.48■□□□□ 0.39
SMC4-204ENST00000462787 NR1D1P20393 614 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 MAP7Q14244 749 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 PI4K2BQ8TCG2 481 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 ARMT1Q9H993 441 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 CNOT10Q9H9A5 744 aaKnown RBP17.47■□□□□ 0.39
SMC4-204ENST00000462787 BTBD18B2RXH4 712 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 KRT25Q7Z3Z0 450 aa17.47■□□□□ 0.39
SMC4-204ENST00000462787 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
SMC4-204ENST00000462787 RPN1P04843 607 aaKnown RBP17.47■□□□□ 0.39
SMC4-204ENST00000462787 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms