RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CABP5Q9NP86 173 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 RBM28Q9NW13 759 aaKnown RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 VPS54Q9P1Q0 977 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 ADD3Q9UEY8 706 aaKnown RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CTNND2Q9UQB3 1225 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 WNT7AO00755 349 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 DDAH1O94760 285 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 PLEKHA8P1O95397 391 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 NTSR2O95665 410 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 XBP1P17861 261 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 OAS2P29728 719 aaKnown RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 IGHMBP2P38935 993 aaKnown RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 BCAMP50895 628 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 EIF5P55010 431 aaKnown RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 AKAP17AQ02040 695 aaKnown RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 RBL2Q08999 1139 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 NPY5RQ15761 445 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 E2F4Q16254 413 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC152Q4G0S7 254 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 TTC38Q5R3I4 469 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 JAKMIP3Q5VZ66 844 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 TMTC3Q6ZXV5 915 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 PPFIBP1Q86W92 1011 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 ENAHQ8N8S7 591 aaPredicted RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 IGSF22Q8N9C0 903 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC51Q96ER9 411 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 EPSTI1Q96J88 318 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 GSDMAQ96QA5 445 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 RIOK1Q9BRS2 568 aaKnown RBP8.4□□□□□ -1.06
SREBF2-204ENST00000462539 EPC1Q9H2F5 836 aa8.4□□□□□ -1.06
SREBF2-204ENST00000462539 TNRC6CQ9HCJ0 1690 aaKnown RBP8.4□□□□□ -1.07
SREBF2-204ENST00000462539 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.07
SREBF2-204ENST00000462539 ERICH4A6NGS2 130 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 POTEB2H3BUK9 544 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 PRDM1O75626 825 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 GYPCP04921 128 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 FGRP09769 529 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CALM1P0DP23 149 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CALM2P0DP24 149 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CALM3P0DP25 149 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CASP1P29466 404 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 TXLNAP40222 546 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 AFMP43652 599 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 STX17P56962 302 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 PIP4K2BP78356 416 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 ATP2C1P98194 919 aaPredicted RBP8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CHRNDQ07001 517 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 BRD3Q15059 726 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 FILIP1LQ4L180 1135 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
SREBF2-204ENST00000462539 KLHL10Q6JEL2 608 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 PDXDC2PQ6P474 469 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 RASGRP2Q7LDG7 609 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 MSANTD4Q8NCY6 345 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 SDR42E1Q8WUS8 393 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CTAGE1Q96RT6 745 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 BRIP1Q9BX63 1249 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 PARD6BQ9BYG5 372 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
SREBF2-204ENST00000462539 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
SREBF2-204ENST00000462539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.39□□□□□ -1.07
SREBF2-204ENST00000462539 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 A0A0U1RQJ8 604 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 MINDY4BA8MYZ0 360 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 PCP11498 1178 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 COPB1P53618 953 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 ERVK-24P63145 666 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 DYNLL1P63167 89 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 SPAG1Q07617 926 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 TUBB2AQ13885 445 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 TRIM14Q14142 442 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 KRT31Q15323 416 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 IFIT1BQ5T764 474 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 INTS5Q6P9B9 1019 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 CATIPQ7Z7H3 387 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 CNGA4Q8IV77 575 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 SMYD4Q8IYR2 804 aaPredicted RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 CEP112Q8N8E3 955 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 ATRIPQ8WXE1 791 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 CDC5LQ99459 802 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 PYM1Q9BRP8 204 aaKnown RBP8.38□□□□□ -1.07
SREBF2-204ENST00000462539 TUBB2BQ9BVA1 445 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 FUT8Q9BYC5 575 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 ANKZF1Q9H8Y5 726 aa8.38□□□□□ -1.07
SREBF2-204ENST00000462539 ARFGAP3Q9NP61 516 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms