RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 ADGRA2Q96PE1 1338 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 CYP2D7A0A087X1C5 515 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 GSG1L2A8MUP6 293 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
DDX39B-216ENST00000462421 TTLL1O95922 423 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 ZKSCAN1P17029 563 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-216ENST00000462421 FLT3LGP49771 235 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 PPARAQ07869 468 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 CASC1Q6TDU7 716 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 ZNF333Q96JL9 665 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 P2RX7Q99572 595 aaKnown RBP10.61□□□□□ -0.71
DDX39B-216ENST00000462421 RNF208Q9H0X6 261 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 VCPKMTQ9H867 229 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 CTNNA3Q9UI47 895 aa10.61□□□□□ -0.71
DDX39B-216ENST00000462421 CCDC171Q6TFL3 1326 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 MYH1P12882 1939 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 LAMB1P07942 1786 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 HMGCRP04035 888 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 PCP11498 1178 aaKnown RBP10.6□□□□□ -0.71
DDX39B-216ENST00000462421 EEF2P13639 858 aaKnown RBP10.6□□□□□ -0.71
DDX39B-216ENST00000462421 IRF5Q13568 498 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
DDX39B-216ENST00000462421 MFSD14CQ5VZR4 134 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 DPP9Q86TI2 863 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 SPICE1Q8N0Z3 855 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 ACER1Q8TDN7 264 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 MORF4L1Q9UBU8 362 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 STX8Q9UNK0 236 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 TMX2Q9Y320 296 aa10.6□□□□□ -0.71
DDX39B-216ENST00000462421 FOCADQ5VW36 1801 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 ZBED4O75132 1171 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 PRDM1O75626 825 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 SLC25A27O95847 323 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 CYP2B6P20813 491 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 NT5C2P49902 561 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 TRDNQ13061 729 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 IMMTQ16891 758 aaKnown RBP10.59□□□□□ -0.71
DDX39B-216ENST00000462421 CCDC178Q5BJE1 867 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 CWC27Q6UX04 472 aaKnown RBP10.59□□□□□ -0.71
DDX39B-216ENST00000462421 MFSD6Q6ZSS7 791 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 NCAPG2Q86XI2 1143 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
DDX39B-216ENST00000462421 NYAP2Q9P242 653 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 CLIP2Q9UDT6 1046 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 SYNPO2Q9UMS6 1093 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 ROBO3Q96MS0 1386 aa10.59□□□□□ -0.71
DDX39B-216ENST00000462421 ZNF213O14771 459 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 STRNO43815 780 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 IGHDP01880 384 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 TFRCP02786 760 aaKnown RBP10.58□□□□□ -0.72
DDX39B-216ENST00000462421 INHAP05111 366 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-216ENST00000462421 CCL5P13501 91 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 SDSP20132 328 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 SLC4A3P48751 1232 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 RGS19P49795 217 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 TFAP4Q01664 338 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 NMIQ13287 307 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-216ENST00000462421 SHROOM1Q2M3G4 852 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-216ENST00000462421 CCDC129Q6ZRS4 1044 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 GPR142Q7Z601 462 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 IQCA1Q86XH1 822 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 ESR2Q92731 530 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 APBA2Q99767 749 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 SLF1Q9BQI6 1058 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 HTATIP2Q9BUP3 242 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 OSBPL3Q9H4L5 887 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 MROH8Q9H579 483 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 HMX1Q9NP08 348 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-216ENST00000462421 ATAD5Q96QE3 1844 aa10.58□□□□□ -0.72
DDX39B-216ENST00000462421 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-216ENST00000462421 CHGBP05060 677 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 FDX1P10109 184 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 FCER1AP12319 257 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 ELNP15502 786 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 RASA1P20936 1047 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 SLC1A4P43007 532 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 JAG1P78504 1218 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 KCTD2Q14681 263 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 CCDC96Q2M329 555 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 FAM83BQ5T0W9 1011 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 PLEKHM2Q8IWE5 1019 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 SHCBP1Q8NEM2 672 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 CHURC1Q8WUH1 139 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 EPB41L4AQ9HCS5 686 aaPredicted RBP10.57□□□□□ -0.72
DDX39B-216ENST00000462421 FEM1BQ9UK73 627 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 GABRQQ9UN88 632 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 MTMR7Q9Y216 660 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 LOC285556D6RIA3 1793 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 RAD50Q92878 1312 aa10.57□□□□□ -0.72
DDX39B-216ENST00000462421 XRCC5P13010 732 aaKnown RBP10.56□□□□□ -0.72
DDX39B-216ENST00000462421 CNGA1P29973 690 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 GUCY1A2P33402 732 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 STAT2P52630 851 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms