RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 IGSF3O75054 1194 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 BMP1P13497 986 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 MRE11P49959 708 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 PPP4CP60510 307 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 CCDC85BQ15834 202 aaPredicted RBP7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 TMEM31Q5JXX7 168 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 GADL1Q6ZQY3 521 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 BADQ92934 168 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 API5Q9BZZ5 524 aaKnown RBP7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 ZNF576Q9H609 170 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 SLC45A1Q9Y2W3 748 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 NDUFB9Q9Y6M9 179 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 A0A0G2JLL6 359 aaPredicted RBP7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 CYP2B6P20813 491 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 ITGA6P23229 1130 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 CWF19L2Q2TBE0 894 aaKnown RBP7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 AKNAD1Q5T1N1 836 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 MAP3K21Q5TCX8 1036 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 ZKSCAN2Q63HK3 967 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 PRRT2Q7Z6L0 340 aaPredicted RBP7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 LINS1Q8NG48 757 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 TRIB2Q92519 343 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 ARHGAP45Q92619 1136 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 PPP1R12CQ9BZL4 782 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 TMOD2Q9NZR1 351 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 NOP58Q9Y2X3 529 aaKnown RBP7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 PCDHB15Q9Y5E8 787 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 ZHX2Q9Y6X8 837 aa7.36□□□□□ -1.23
SMARCC1-204ENST00000462198 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 NEURL1BA8MQ27 555 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 IGKV5-2P06315 115 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 RBM10P98175 930 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 HDLBPQ00341 1268 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 GRIK5Q16478 980 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 CSPP1Q1MSJ5 1256 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 NOL9Q5SY16 702 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 FKBP1CQ5VVH2 108 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 ATF7IPQ6VMQ6 1270 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 TRIM67Q6ZTA4 783 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 TDRD7Q8NHU6 1098 aaKnown RBP7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 SRCIN1Q9C0H9 1055 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 AFG3L2Q9Y4W6 797 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 LTBP2Q14767 1821 aa7.35□□□□□ -1.23
SMARCC1-204ENST00000462198 PLXNB2O15031 1838 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 PLIN1O60240 522 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 ALDH1L1O75891 902 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 TRIM27P14373 513 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 NDUFV2P19404 249 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 BRD2P25440 801 aaKnown RBP7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 DNAJB2P25686 324 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 RTP1P59025 263 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 GCKRQ14397 625 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 FAM110CQ1W6H9 321 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 BEND3Q5T5X7 828 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 SND1Q7KZF4 910 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 UBE3BQ7Z3V4 1068 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 FTSJ3Q8IY81 847 aaKnown RBP7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 FAM151AQ8WW52 585 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 RNPC3Q96LT9 517 aaKnown RBP7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 PRDM12Q9H4Q4 367 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 PRDM5Q9NQX1 630 aaPredicted RBP7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 C9orf78Q9NZ63 289 aaPredicted RBP7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 ATP11BQ9Y2G3 1177 aa7.34□□□□□ -1.23
SMARCC1-204ENST00000462198 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 H7C1W4 665 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 SMIM22K7EJ46 135 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 GRM8O00222 908 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 DGAT1O75907 488 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 CSF1RP07333 972 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 XRCC5P13010 732 aaKnown RBP7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 PTPRAP18433 802 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 RFX1P22670 979 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 IGFBP4P22692 258 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 HIBADHP31937 336 aaKnown RBP7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 TCP10Q12799 353 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 APOBEC3HQ6NTF7 200 aaKnown RBP7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 SLC39A5Q6ZMH5 540 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 TEKT1Q969V4 418 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 TIFAQ96CG3 184 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 ZDHHC15Q96MV8 337 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 MRIQ9BWK5 157 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 ALG2Q9H553 416 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 PICK1Q9NRD5 415 aa7.33□□□□□ -1.24
SMARCC1-204ENST00000462198 PLXNA1Q9UIW2 1896 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 ANKRD18BA2A2Z9 1011 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 TRIM43BA6NCK2 446 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 FAM86C2PA6NEL3 165 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 NCLP19338 710 aaKnown RBP7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 GYG1P46976 350 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 GCLCP48506 637 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 EPHB4P54760 987 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms