RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 USP17L11C9JVI0 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 USP17L18D6R9N7 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 USP17L22D6RA61 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 USP17L17D6RBQ6 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 USP17L19D6RCP7 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 USP17L20D6RJB6 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 RAD21O60216 631 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 CDC45O75419 566 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 TTLL1O95922 423 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 GSPT1P15170 499 aaKnown RBP9.68□□□□□ -0.86
SSR1-203ENST00000462112 USP17L24Q0WX57 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 SEPT2Q15019 361 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 IQCA1Q86XH1 822 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 STK11IPQ8N1F8 1099 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 FAM43AQ8N2R8 423 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 ESR2Q92731 530 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 KRT23Q9C075 422 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 EPB41L4AQ9HCS5 686 aaPredicted RBP9.68□□□□□ -0.86
SSR1-203ENST00000462112 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
SSR1-203ENST00000462112 HOXC10Q9NYD6 342 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 LAMB1P07942 1786 aa9.68□□□□□ -0.86
SSR1-203ENST00000462112 ORC4O43929 436 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 AKR1B1P15121 316 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 RASA1P20936 1047 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 HOXA7P31268 230 aaPredicted RBP9.67□□□□□ -0.86
SSR1-203ENST00000462112 PSEN1P49768 467 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 PRMT2P55345 433 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 CCNA1P78396 465 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 TFAP4Q01664 338 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 ZYXQ15942 572 aaKnown RBP9.67□□□□□ -0.86
SSR1-203ENST00000462112 RRP12Q5JTH9 1297 aaKnown RBP9.67□□□□□ -0.86
SSR1-203ENST00000462112 AKNAD1Q5T1N1 836 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 CTU1Q7Z7A3 348 aaKnown RBP9.67□□□□□ -0.86
SSR1-203ENST00000462112 SLC44A5Q8NCS7 719 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 NEDD1Q8NHV4 660 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 C12orf42Q96LP6 360 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 PTPN18Q99952 460 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 NYAP2Q9P242 653 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 TSKSQ9UJT2 592 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 TMX2Q9Y320 296 aa9.67□□□□□ -0.86
SSR1-203ENST00000462112 DDX60LQ5H9U9 1706 aaKnown RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 ERICH2A1L162 156 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 WDR46O15213 610 aaKnown RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 SGSM2O43147 1006 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 PRDM1O75626 825 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 REC8O95072 547 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 EEF2P13639 858 aaKnown RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 SART3Q15020 963 aaKnown RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 VPS53Q5VIR6 699 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 RALYLQ86SE5 291 aaKnown RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 ZNF589Q86UQ0 364 aaPredicted RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 MB21D1Q8N884 522 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 TTC14Q96N46 770 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 TANGO6Q9C0B7 1094 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 VCPKMTQ9H867 229 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 CLIP2Q9UDT6 1046 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 ISY1Q9ULR0 285 aaKnown RBP9.66□□□□□ -0.86
SSR1-203ENST00000462112 STX8Q9UNK0 236 aa9.66□□□□□ -0.86
SSR1-203ENST00000462112 MAP3K13O43283 966 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
SSR1-203ENST00000462112 SLURP2P0DP57 97 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 FDX1P10109 184 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 ZKSCAN1P17029 563 aaPredicted RBP9.65□□□□□ -0.86
SSR1-203ENST00000462112 CLCN6P51797 869 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 FCGRTP55899 365 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 HAND2P61296 217 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 DGKZQ13574 1117 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 RRP1BQ14684 758 aaKnown RBP9.65□□□□□ -0.86
SSR1-203ENST00000462112 COG2Q14746 738 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 GPAT2Q6NUI2 795 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 CCDC84Q86UT8 332 aaPredicted RBP9.65□□□□□ -0.86
SSR1-203ENST00000462112 STAG1Q8WVM7 1258 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 COA7Q96BR5 231 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 UBAC1Q9BSL1 405 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 ASCC2Q9H1I8 757 aaPredicted RBP9.65□□□□□ -0.86
SSR1-203ENST00000462112 ANO2Q9NQ90 1003 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 MTMR4Q9NYA4 1195 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 SIPA1L1O43166 1804 aa9.65□□□□□ -0.86
SSR1-203ENST00000462112 PLIN4Q96Q06 1357 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 MYPNQ86TC9 1320 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 CYP2C8P10632 490 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 VCAM1P19320 739 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 COPB2P35606 906 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 IKQ13123 557 aaPredicted RBP9.64□□□□□ -0.87
SSR1-203ENST00000462112 FAM110CQ1W6H9 321 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 TREML2Q5T2D2 321 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 CATSPERGQ6ZRH7 1159 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 NBPF11Q86T75 865 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 GPRC5AQ8NFJ5 357 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 NCOA7Q8NI08 942 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 CHURC1Q8WUH1 139 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 MKL1Q969V6 931 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
SSR1-203ENST00000462112 RPAP3Q9H6T3 665 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms