RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CNMDO75829 334 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 HMGCRP04035 888 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 VCAM1P19320 739 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 RRP1P56182 461 aaKnown RBP11.02□□□□□ -0.65
BRCA1-207ENST00000461798 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
BRCA1-207ENST00000461798 SOCS4Q8WXH5 440 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 GPATCH3Q96I76 525 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 STRBPQ96SI9 672 aaKnown RBP11.02□□□□□ -0.65
BRCA1-207ENST00000461798 NUDT12Q9BQG2 462 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 CENPFP49454 3210 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 MGAMO43451 1857 aa11.02□□□□□ -0.65
BRCA1-207ENST00000461798 DDX60LQ5H9U9 1706 aaKnown RBP11.01□□□□□ -0.65
BRCA1-207ENST00000461798 RNF113AO15541 343 aaKnown RBP11.01□□□□□ -0.65
BRCA1-207ENST00000461798 PEX10O60683 326 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 ZFYP08048 801 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-207ENST00000461798 CDK8P49336 464 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 CCNA1P78396 465 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 COG2Q14746 738 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 SBK1Q52WX2 424 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 MORN1Q5T089 497 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 MAP3K21Q5TCX8 1036 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 CTR9Q6PD62 1173 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 C16orf86Q6ZW13 317 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 GPR142Q7Z601 462 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 PLEKHH3Q7Z736 793 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 AMOTL1Q8IY63 956 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 SLC44A5Q8NCS7 719 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 APPBP2Q92624 585 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 DDRGK1Q96HY6 314 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-207ENST00000461798 PORCNQ9H237 461 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 HOXC10Q9NYD6 342 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 TMX2Q9Y320 296 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 SLC4A4Q9Y6R1 1079 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 TTC41PQ6P2S7 1318 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 RPTORQ8N122 1335 aa11.01□□□□□ -0.65
BRCA1-207ENST00000461798 CYP2D7A0A087X1C5 515 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 SPDYE16A6NNV3 312 aaPredicted RBP11□□□□□ -0.65
BRCA1-207ENST00000461798 GSG1L2A8MUP6 293 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 SMIM22K7EJ46 135 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
BRCA1-207ENST00000461798 AKR1B1P15121 316 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 CYP2B6P20813 491 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 ZYXQ15942 572 aaKnown RBP11□□□□□ -0.65
BRCA1-207ENST00000461798 TRIB2Q92519 343 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 LPAR1Q92633 364 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 OSBP2Q969R2 916 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 XRN2Q9H0D6 950 aaKnown RBP eCLIP11□□□□□ -0.65
BRCA1-207ENST00000461798 RPAP3Q9H6T3 665 aaPredicted RBP11□□□□□ -0.65
BRCA1-207ENST00000461798 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
BRCA1-207ENST00000461798 DOCK3Q8IZD9 2030 aa11□□□□□ -0.65
BRCA1-207ENST00000461798 ERC2O15083 957 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 GLRX3O76003 335 aaKnown RBP10.99□□□□□ -0.65
BRCA1-207ENST00000461798 FARP2O94887 1054 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-207ENST00000461798 TFRCP02786 760 aaKnown RBP10.99□□□□□ -0.65
BRCA1-207ENST00000461798 HOXC6P09630 235 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 GNAT2P19087 354 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 PTPREP23469 700 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 RGS2P41220 211 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 AAMPQ13685 434 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
BRCA1-207ENST00000461798 CCAR1Q8IX12 1150 aaKnown RBP10.99□□□□□ -0.65
BRCA1-207ENST00000461798 ANKLE1Q8NAG6 615 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 PI4K2BQ8TCG2 481 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 HTATIP2Q9BUP3 242 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 SH2D4AQ9H788 454 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 KANSL2Q9H9L4 492 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 ARHGEF10LQ9HCE6 1279 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 BTBD7Q9P203 1132 aa10.99□□□□□ -0.65
BRCA1-207ENST00000461798 ARPP21Q9UBL0 812 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-207ENST00000461798 SLC15A5A6NIM6 579 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 H0YGN5 161 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 ICA1Q05084 483 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 TRIM32Q13049 653 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 MAP2K5Q13163 448 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 HDAC1Q13547 482 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-207ENST00000461798 HABP4Q5JVS0 413 aaKnown RBP10.98□□□□□ -0.65
BRCA1-207ENST00000461798 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 TSHZ3Q63HK5 1081 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 MB21D1Q8N884 522 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.98□□□□□ -0.65
BRCA1-207ENST00000461798 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 SALL3Q9BXA9 1300 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 MKI67P46013 3256 aaKnown RBP10.98□□□□□ -0.65
BRCA1-207ENST00000461798 BRCA2P51587 3418 aa10.98□□□□□ -0.65
BRCA1-207ENST00000461798 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
BRCA1-207ENST00000461798 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
BRCA1-207ENST00000461798 GPAA1O43292 621 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 STRNO43815 780 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 IGHA2P01877 340 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 EEF2P13639 858 aaKnown RBP10.97□□□□□ -0.65
BRCA1-207ENST00000461798 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 OTUD7AQ8TE49 926 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-207ENST00000461798 DPF3Q92784 378 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms