RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 C11orf49Q9H6J7 331 aa21.53■■□□□ 1.04
SSB-206ENST00000461708 SH2D4AQ9H788 454 aa21.53■■□□□ 1.04
SSB-206ENST00000461708 IVNS1ABPQ9Y6Y0 642 aa21.53■■□□□ 1.04
SSB-206ENST00000461708 RLFQ13129 1914 aa21.53■■□□□ 1.04
SSB-206ENST00000461708 PRKAB2O43741 272 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 C20orf194Q5TEA3 1177 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 MFSD14CQ5VZR4 134 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 LHX8Q68G74 356 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 MB21D1Q8N884 522 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 SLC44A5Q8NCS7 719 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 ARHGEF10LQ9HCE6 1279 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 TMX2Q9Y320 296 aa21.52■■□□□ 1.04
SSB-206ENST00000461708 ZNF236Q9UL36 1845 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 STRNO43815 780 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 SIAH1Q8IUQ4 282 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 SHCBP1Q8NEM2 672 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 DYNLL2Q96FJ2 89 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 BCL11AQ9H165 835 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 ECHDC1Q9NTX5 307 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 A0A0G2JMZ2 1700 aa21.51■■□□□ 1.03
SSB-206ENST00000461708 USP17L12C9JPN9 530 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 USP17L21D6R901 530 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 IGHA2P01877 340 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 COL6A1P12109 1028 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 SLFNL1Q499Z3 407 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 C16orf86Q6ZW13 317 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 TANGO6Q9C0B7 1094 aa21.5■■□□□ 1.03
SSB-206ENST00000461708 MSCO60682 206 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 AKR1B1P15121 316 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 CCND3P30281 292 aaPredicted RBP21.49■■□□□ 1.03
SSB-206ENST00000461708 BMP8BP34820 402 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 CDK8P49336 464 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 ICA1Q05084 483 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 WDR78Q5VTH9 848 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 MOV10L1Q9BXT6 1211 aaKnown RBP21.49■■□□□ 1.03
SSB-206ENST00000461708 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 DCTPP1Q9H773 170 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 VCPKMTQ9H867 229 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 LAMA3Q16787 3333 aa21.49■■□□□ 1.03
SSB-206ENST00000461708 DNAH12Q6ZR08 3092 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 DSG3P32926 999 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 ATP2B2Q01814 1243 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 GDF15Q99988 308 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 KANSL2Q9H9L4 492 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 FLRT1Q9NZU1 646 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 SLC4A4Q9Y6R1 1079 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 PFASO15067 1338 aa21.48■■□□□ 1.03
SSB-206ENST00000461708 WDR46O15213 610 aaKnown RBP21.47■■□□□ 1.03
SSB-206ENST00000461708 KIAA1755Q5JYT7 1200 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 GIMAP6Q6P9H5 292 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 CTR9Q6PD62 1173 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 C7orf61Q8IZ16 206 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 ABRAQ8N0Z2 381 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 GPATCH3Q96I76 525 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 PUS7LQ9H0K6 701 aaKnown RBP21.47■■□□□ 1.03
SSB-206ENST00000461708 MROH8Q9H579 483 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 STAP2Q9UGK3 403 aa21.47■■□□□ 1.03
SSB-206ENST00000461708 PARP14Q460N5 1801 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 FRMPD3Q5JV73 1810 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 CYP2D7A0A087X1C5 515 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 SMARCA5O60264 1052 aaPredicted RBP21.46■■□□□ 1.03
SSB-206ENST00000461708 SBK1Q52WX2 424 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 OLFML2BQ68BL8 750 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 KBTBD3Q8NAB2 608 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 STRBPQ96SI9 672 aaKnown RBP21.46■■□□□ 1.03
SSB-206ENST00000461708 ARPP21Q9UBL0 812 aaPredicted RBP21.46■■□□□ 1.03
SSB-206ENST00000461708 ADAMTS5Q9UNA0 930 aa21.46■■□□□ 1.03
SSB-206ENST00000461708 FLOT1O75955 427 aa21.45■■□□□ 1.02
SSB-206ENST00000461708 CHGBP05060 677 aa21.45■■□□□ 1.02
SSB-206ENST00000461708 ADORA2AP29274 412 aa21.45■■□□□ 1.02
SSB-206ENST00000461708 DPP9Q86TI2 863 aa21.45■■□□□ 1.02
SSB-206ENST00000461708 NPLOC4Q8TAT6 608 aa21.45■■□□□ 1.02
SSB-206ENST00000461708 SLC5A4Q9NY91 659 aa21.45■■□□□ 1.02
SSB-206ENST00000461708 DDX20Q9UHI6 824 aaKnown RBP21.45■■□□□ 1.02
SSB-206ENST00000461708 SMIM22K7EJ46 135 aa21.44■■□□□ 1.02
SSB-206ENST00000461708 ZFYP08048 801 aaPredicted RBP21.44■■□□□ 1.02
SSB-206ENST00000461708 ERCC3P19447 782 aa21.44■■□□□ 1.02
SSB-206ENST00000461708 CLEC10AQ8IUN9 316 aa21.44■■□□□ 1.02
SSB-206ENST00000461708 GREB1LQ9C091 1923 aaPredicted RBP21.43■■□□□ 1.02
SSB-206ENST00000461708 CYBAP13498 195 aa21.43■■□□□ 1.02
SSB-206ENST00000461708 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
SSB-206ENST00000461708 SPICE1Q8N0Z3 855 aa21.43■■□□□ 1.02
SSB-206ENST00000461708 APPBP2Q92624 585 aa21.43■■□□□ 1.02
SSB-206ENST00000461708 GOPCQ9HD26 462 aa21.43■■□□□ 1.02
SSB-206ENST00000461708 GSG1L2A8MUP6 293 aa21.42■■□□□ 1.02
SSB-206ENST00000461708 SLC25A27O95847 323 aa21.42■■□□□ 1.02
SSB-206ENST00000461708 CYP2C19P33261 490 aa21.42■■□□□ 1.02
SSB-206ENST00000461708 ATG4CQ96DT6 458 aa21.42■■□□□ 1.02
SSB-206ENST00000461708 ROBO3Q96MS0 1386 aa21.42■■□□□ 1.02
SSB-206ENST00000461708 ZMYND8Q9ULU4 1186 aaPredicted RBP21.42■■□□□ 1.02
SSB-206ENST00000461708 ZNFX1Q9P2E3 1918 aaKnown RBP21.41■■□□□ 1.02
SSB-206ENST00000461708 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
SSB-206ENST00000461708 GNAT2P19087 354 aa21.41■■□□□ 1.02
SSB-206ENST00000461708 LRRFIP1Q32MZ4 808 aaKnown RBP21.41■■□□□ 1.02
SSB-206ENST00000461708 TRPV1Q8NER1 839 aa21.41■■□□□ 1.02
SSB-206ENST00000461708 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
SSB-206ENST00000461708 DNM1LO00429 736 aa21.4■■□□□ 1.02
SSB-206ENST00000461708 FCER1AP12319 257 aa21.4■■□□□ 1.02
SSB-206ENST00000461708 CNGA1P29973 690 aa21.4■■□□□ 1.02
SSB-206ENST00000461708 PLS1Q14651 629 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms