RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 NACAP1Q9BZK3 213 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 IL17RBQ9NRM6 502 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 GOLGA6L6A8MZA4 724 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 DYNC1I1O14576 645 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 IL1R1P14778 569 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 ZNF174Q15697 407 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 TYW1BQ6NUM6 668 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 RASGRP4Q8TDF6 673 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 PHF20Q9BVI0 1012 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 CNNM2Q9H8M5 875 aa8.4□□□□□ -1.06
NPHP1-209ENST00000461707 CDKL5O76039 1030 aa8.4□□□□□ -1.07
NPHP1-209ENST00000461707 FANCCQ00597 558 aa8.4□□□□□ -1.07
NPHP1-209ENST00000461707 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.07
NPHP1-209ENST00000461707 OLFM4Q6UX06 510 aa8.4□□□□□ -1.07
NPHP1-209ENST00000461707 SETDB2Q96T68 719 aa8.4□□□□□ -1.07
NPHP1-209ENST00000461707 NARFQ9UHQ1 456 aa8.4□□□□□ -1.07
NPHP1-209ENST00000461707 MAN1B1Q9UKM7 699 aa8.4□□□□□ -1.07
NPHP1-209ENST00000461707 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 CAVIN2O95810 425 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 DPYDQ12882 1025 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 TRIM29Q14134 588 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 CAVIN4Q5BKX8 364 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 DAGLBQ8NCG7 672 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 CNNM3Q8NE01 707 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 SH3RF3Q8TEJ3 882 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 LRRC15Q8TF66 581 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 MTMR8Q96EF0 704 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 A0A0U1RQJ8 604 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 SNHG28P0DPA3 235 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 GNAT2P19087 354 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 PTPREP23469 700 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 HIBADHP31937 336 aaKnown RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 PLCD1P51178 756 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 PPP4CP60510 307 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 IFIT1BQ5T764 474 aaKnown RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 FOXR2Q6PJQ5 311 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 ATRIPQ8WXE1 791 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 SAMSN1Q9NSI8 373 aaKnown RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 PGAP2Q9UHJ9 254 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 CCNL1Q9UK58 526 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 ZNF652Q9Y2D9 606 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
NPHP1-209ENST00000461707 AFMP43652 599 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 MTRQ99707 1265 aa8.39□□□□□ -1.07
NPHP1-209ENST00000461707 FAM205AQ6ZU69 1335 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 DEXIO95424 95 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 DPY19L2P1Q6NXN4 242 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 ZC3H3Q8IXZ2 948 aaKnown RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 TMEM174Q8WUU8 243 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 ESR2Q92731 530 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 NLRP3Q96P20 1036 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 SAP30BPQ9UHR5 308 aaKnown RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 CNTNAP5Q8WYK1 1306 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 ERICH2A1L162 156 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 CUTAO60888 179 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 CPLX2Q6PUV4 134 aaKnown RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 FAM196AQ6ZSG2 479 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 DHX58Q96C10 678 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 PRIMPOLQ96LW4 560 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 PDCL3Q9H2J4 239 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 GOLGA8HP0CJ92 632 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 STX17P56962 302 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 EHHADHQ08426 723 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 NCBP1Q09161 790 aaKnown RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 NOL10Q9BSC4 688 aaKnown RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 FOXP1Q9H334 677 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-209ENST00000461707 MCM9Q9NXL9 1143 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 PLXNA1Q9UIW2 1896 aa8.38□□□□□ -1.07
NPHP1-209ENST00000461707 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 GABPAQ06546 454 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 CT47A1Q5JQC4 288 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-209ENST00000461707 TRIM22Q8IYM9 498 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 AKT1S1Q96B36 256 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 BLZF1Q9H2G9 400 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 FLT1P17948 1338 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 BHMG1C9JSJ3 638 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-209ENST00000461707 ZPR1O75312 459 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 POSTNQ15063 836 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 SYMPKQ92797 1274 aaKnown RBP8.37□□□□□ -1.07
NPHP1-209ENST00000461707 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 MYO3BQ8WXR4 1341 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 PCNTO95613 3336 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 PP2D1A8MPX8 630 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 IKBKBO14920 756 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 NPHP1O15259 732 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 CYTH3O43739 400 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-209ENST00000461707 SART3Q15020 963 aaKnown RBP8.37□□□□□ -1.07
NPHP1-209ENST00000461707 PIK3AP1Q6ZUJ8 805 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 TMTC3Q6ZXV5 915 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 OLIG1Q8TAK6 271 aa8.37□□□□□ -1.07
NPHP1-209ENST00000461707 KIAA1217Q5T5P2 1943 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms