RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 DCAF15Q66K64 600 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 SLFN13Q68D06 897 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 PRMT6Q96LA8 375 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 ZNF70Q9UC06 446 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 HERC5Q9UII4 1024 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 ELP1O95163 1332 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 FRMPD2Q68DX3 1309 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 TNRC6CQ9HCJ0 1690 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 SPDYE2BA6NHP3 402 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 SMIM22K7EJ46 135 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GH2P01242 217 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 MMP1P03956 469 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 SPDYE6P0CI01 402 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 TROAPQ12815 778 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 TTLL12Q14166 644 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 TBC1D10BQ4KMP7 808 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 USP17L2Q6R6M4 530 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 TMEM87AQ8NBN3 555 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 C7orf43Q8WVR3 580 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 CUL5Q93034 780 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 NAT10Q9H0A0 1025 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 FOXP1Q9H334 677 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GRPEL1Q9HAV7 217 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GJB4Q9NTQ9 266 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 IRS2Q9Y4H2 1338 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 DUOX1Q9NRD9 1551 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 FDPSP14324 419 aaKnown RBP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 NF2P35240 595 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 GMPSP49915 693 aaPredicted RBP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 MRPL12P52815 198 aaKnown RBP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 PIK3AP1Q6ZUJ8 805 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 MICALL2Q8IY33 904 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 KRI1Q8N9T8 703 aaKnown RBP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 FAM151AQ8WW52 585 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 GPKOWQ92917 476 aaPredicted RBP eCLIP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 CCDC47Q96A33 483 aaKnown RBP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 IDI2Q9BXS1 227 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 UBA5Q9GZZ9 404 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 EHD4Q9H223 541 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 DDX4Q9NQI0 724 aaKnown RBP4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 PICK1Q9NRD5 415 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 TCP11L1Q9NUJ3 509 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 MTMR4Q9NYA4 1195 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 RTEL1Q9NZ71 1219 aa4.71□□□□□ -1.65
ATP13A3-206ENST00000461660 GOLGA6L6A8MZA4 724 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 VIL1P09327 827 aaKnown RBP4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 FGRP09769 529 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 SYKP43405 635 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 MMP14P50281 582 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 RASSF7Q02833 373 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 SEPT2Q15019 361 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 ZYXQ15942 572 aaKnown RBP4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 TTC38Q5R3I4 469 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 GALNT17Q6IS24 598 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 DPY19L2Q6NUT2 758 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 KRT25Q7Z3Z0 450 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 CKAP2LQ8IYA6 745 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 BLIDQ8IZY5 108 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 MAP3K14Q99558 947 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 GLT8D2Q9H1C3 349 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 GOPCQ9HD26 462 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 MYOZ2Q9NPC6 264 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 RNF181Q9P0P0 153 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 YDJCA8MPS7 323 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 ASNSP08243 561 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 LMNB1P20700 586 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 ADCY7P51828 1080 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 FAM160A1Q05DH4 1040 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 KIF4BQ2VIQ3 1234 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 LRSAM1Q6UWE0 723 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 DRC7Q8IY82 874 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 CEP57L1Q8IYX8 460 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 REXO1Q8N1G1 1221 aaKnown RBP4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 SRBD1Q8N5C6 995 aaKnown RBP4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 GPT2Q8TD30 523 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 CDK5RAP3Q96JB5 506 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 RAB34Q9BZG1 259 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 POLR3EQ9NVU0 708 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 CNOT7Q9UIV1 285 aaKnown RBP4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 RCOR1Q9UKL0 485 aa4.71□□□□□ -1.66
ATP13A3-206ENST00000461660 ROBO3Q96MS0 1386 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 SMCO2A6NFE2 343 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 USP17L5A8MUK1 530 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 CUTAO60888 179 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 EEF2P13639 858 aaKnown RBP4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 MCM7P33993 719 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF76P36508 570 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 EVX2Q03828 476 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 NR5A1Q13285 461 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 RASA3Q14644 834 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 NONOQ15233 471 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 ZNF174Q15697 407 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 PFKFB3Q16875 520 aaPredicted RBP4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 TMEM266Q2M3C6 531 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 MIGA2Q7L4E1 593 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 CLEC10AQ8IUN9 316 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 APOBEC3FQ8IUX4 373 aaKnown RBP4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 SULF1Q8IWU6 871 aa4.7□□□□□ -1.66
ATP13A3-206ENST00000461660 CNNM3Q8NE01 707 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms