RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 BAZ2BQ9UIF8 2168 aaKnown RBP12.83□□□□□ -0.36
COPS7B-217ENST00000461350 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
COPS7B-217ENST00000461350 TPM4P67936 248 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 PDE4BQ07343 736 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
COPS7B-217ENST00000461350 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 OSBPL5Q9H0X9 879 aaPredicted RBP12.83□□□□□ -0.36
COPS7B-217ENST00000461350 IMPACTQ9P2X3 320 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 NDUFA8P51970 172 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 NTRK3Q16288 839 aa12.83□□□□□ -0.36
COPS7B-217ENST00000461350 IFIT1BQ5T764 474 aaKnown RBP12.83□□□□□ -0.36
COPS7B-217ENST00000461350 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
COPS7B-217ENST00000461350 ORC4O43929 436 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 C8orf76Q96K31 380 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 KIAA1468Q9P260 1216 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 TFAP4Q01664 338 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 RTN1Q16799 776 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 ARMCX5Q6P1M9 558 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
COPS7B-217ENST00000461350 SLC26A6Q9BXS9 759 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
COPS7B-217ENST00000461350 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
COPS7B-217ENST00000461350 PLCG2P16885 1265 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 CACNB3P54284 484 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 ISM2Q6H9L7 571 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 AMOTL1Q8IY63 956 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
COPS7B-217ENST00000461350 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 SNED1Q8TER0 1413 aa12.82□□□□□ -0.36
COPS7B-217ENST00000461350 MYH1P12882 1939 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 YDJCA8MPS7 323 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
COPS7B-217ENST00000461350 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
COPS7B-217ENST00000461350 BMS1Q14692 1282 aaKnown RBP12.81□□□□□ -0.36
COPS7B-217ENST00000461350 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 LRRN4CLQ8ND94 238 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 ZNF446Q9NWS9 450 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
COPS7B-217ENST00000461350 GUCY1A2P33402 732 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 ARHGAP29Q52LW3 1261 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
COPS7B-217ENST00000461350 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 CLIC4Q9Y696 253 aa12.81□□□□□ -0.36
COPS7B-217ENST00000461350 hCG_1642624A0A1W2PR95 340 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
COPS7B-217ENST00000461350 CRKP46108 304 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
COPS7B-217ENST00000461350 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
COPS7B-217ENST00000461350 CDC42EP5Q6NZY7 148 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 FBXO18Q8NFZ0 1043 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 L2HGDHQ9H9P8 463 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 IL17RBQ9NRM6 502 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 KCND1Q9NSA2 647 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.8□□□□□ -0.36
COPS7B-217ENST00000461350 CDKL5O76039 1030 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 NFIAQ12857 509 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
COPS7B-217ENST00000461350 A0A1W2PQ27 194 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 A0A1W2PQ64 194 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 A0A1W2PQD8 194 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 SPTLC2O15270 562 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 RAD17O75943 681 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 CLCN6P51797 869 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 CATIPQ7Z7H3 387 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-217ENST00000461350 MNS1Q8NEH6 495 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 KCNG4Q8TDN1 519 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 MTA3Q9BTC8 594 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 RASA1P20936 1047 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 CDK8P49336 464 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 SSRP1Q08945 709 aaKnown RBP12.79□□□□□ -0.36
COPS7B-217ENST00000461350 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 RCSD1Q6JBY9 416 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 UBXN4Q92575 508 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 PLEKHA8P1O95397 391 aa12.79□□□□□ -0.36
COPS7B-217ENST00000461350 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms