RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
APTX-209ENST00000460940 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
APTX-209ENST00000460940 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
APTX-209ENST00000460940 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
APTX-209ENST00000460940 GOPCQ9HD26 462 aa13.07□□□□□ -0.32
APTX-209ENST00000460940 PRDM10Q9NQV6 1147 aa13.07□□□□□ -0.32
APTX-209ENST00000460940 TCP11L1Q9NUJ3 509 aa13.07□□□□□ -0.32
APTX-209ENST00000460940 NEDD4P46934 1319 aa13.07□□□□□ -0.32
APTX-209ENST00000460940 REC8O95072 547 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 CYP21A2P08686 494 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 VCAM1P19320 739 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 OSBPP22059 807 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
APTX-209ENST00000460940 MKL1Q969V6 931 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 ADGRA2Q96PE1 1338 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 TLR2O60603 784 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 LBX1P52954 281 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 IRX3P78415 501 aaPredicted RBP13.06□□□□□ -0.32
APTX-209ENST00000460940 FGD1P98174 961 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 TRDNQ13061 729 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
APTX-209ENST00000460940 TSKSQ9UJT2 592 aa13.06□□□□□ -0.32
APTX-209ENST00000460940 USP17L15C9J2P7 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L13C9JLJ4 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L11C9JVI0 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L18D6R9N7 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L22D6RA61 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L17D6RBQ6 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L19D6RCP7 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L20D6RJB6 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 GPR25O00155 361 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
APTX-209ENST00000460940 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
APTX-209ENST00000460940 NOVP48745 357 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 USP17L24Q0WX57 530 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 DGKZQ13574 1117 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
APTX-209ENST00000460940 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
APTX-209ENST00000460940 CYP2C8P10632 490 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 GCLCP48506 637 aaPredicted RBP13.04□□□□□ -0.32
APTX-209ENST00000460940 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 GMCL1P1Q8NEA9 526 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 ASCC2Q9H1I8 757 aaPredicted RBP13.04□□□□□ -0.32
APTX-209ENST00000460940 R3HDMLQ9H3Y0 253 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 RPAP3Q9H6T3 665 aaPredicted RBP13.04□□□□□ -0.32
APTX-209ENST00000460940 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 STX8Q9UNK0 236 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 B4E1Z4 1266 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 E7EWF7 191 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 SLC27A2O14975 620 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 FKTNO75072 461 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 KDM4AO75164 1064 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 CREB3L3Q68CJ9 461 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
APTX-209ENST00000460940 TTC14Q96N46 770 aa13.04□□□□□ -0.32
APTX-209ENST00000460940 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
APTX-209ENST00000460940 C17orf99Q6UX52 265 aa13.03□□□□□ -0.32
APTX-209ENST00000460940 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
APTX-209ENST00000460940 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
APTX-209ENST00000460940 ZNF296Q8WUU4 475 aaPredicted RBP13.03□□□□□ -0.32
APTX-209ENST00000460940 F5H6K3 240 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 NMT2O60551 498 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 NDUFB10O96000 172 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 BCRP11274 1271 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 TOP1P11387 765 aaKnown RBP13.02□□□□□ -0.32
APTX-209ENST00000460940 KLRC3Q07444 240 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 LBX2Q6XYB7 198 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 DGKHQ86XP1 1220 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 SPICE1Q8N0Z3 855 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.32
APTX-209ENST00000460940 ERO1AQ96HE7 468 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 MYPNQ86TC9 1320 aa13.02□□□□□ -0.32
APTX-209ENST00000460940 MYH4Q9Y623 1939 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 ZKSCAN1P17029 563 aaPredicted RBP13.02□□□□□ -0.33
APTX-209ENST00000460940 HERVK_113P62684 666 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 SP3Q02447 781 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 HSP90AA2PQ14568 343 aaPredicted RBP13.02□□□□□ -0.33
APTX-209ENST00000460940 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 KIAA1755Q5JYT7 1200 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 STOX1Q6ZVD7 989 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 GMCL1Q96IK5 515 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 ZSCAN10Q96SZ4 725 aaPredicted RBP13.02□□□□□ -0.33
APTX-209ENST00000460940 ZSWIM5Q9P217 1185 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
APTX-209ENST00000460940 RAD21O60216 631 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 KRT32Q14532 448 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 P2RX7Q99572 595 aaKnown RBP13.01□□□□□ -0.33
APTX-209ENST00000460940 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 RRAGDQ9NQL2 400 aaPredicted RBP13.01□□□□□ -0.33
APTX-209ENST00000460940 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms