RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 WASH4PA8MWX3 477 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 TRHRP34981 398 aaPredicted RBP6.15□□□□□ -1.42
CCDC58-202ENST00000460810 TAGLNQ01995 201 aaKnown RBP6.15□□□□□ -1.42
CCDC58-202ENST00000460810 EGR3Q06889 387 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 TSPYL5Q86VY4 417 aaPredicted RBP6.15□□□□□ -1.42
CCDC58-202ENST00000460810 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.42
CCDC58-202ENST00000460810 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 DPH2Q9BQC3 489 aaPredicted RBP6.15□□□□□ -1.42
CCDC58-202ENST00000460810 MCOLN1Q9GZU1 580 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 RNF19AQ9NV58 838 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 PCDHB5Q9Y5E4 795 aa6.15□□□□□ -1.42
CCDC58-202ENST00000460810 HSP90B1P14625 803 aaKnown RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 EIF4BP23588 611 aaKnown RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 DLG4P78352 724 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 PSMD2Q13200 908 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 SEPT6Q14141 434 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 SNX17Q15036 470 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 CCDC85BQ15834 202 aaPredicted RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 TSNAXIP1Q2TAA8 658 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 SPPL2CQ8IUH8 684 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 FAM177A1Q8N128 213 aaPredicted RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 MIR1-1HGQ9H1L0 117 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 C19orf44Q9H6X5 657 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 ZNF552Q9H707 407 aaPredicted RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 PARP2Q9UGN5 583 aa6.14□□□□□ -1.43
CCDC58-202ENST00000460810 YBX2Q9Y2T7 364 aaKnown RBP6.14□□□□□ -1.43
CCDC58-202ENST00000460810 HMGB1P09429 215 aaKnown RBP6.13□□□□□ -1.43
CCDC58-202ENST00000460810 GNA15P30679 374 aa6.13□□□□□ -1.43
CCDC58-202ENST00000460810 RPL6Q02878 288 aaKnown RBP6.13□□□□□ -1.43
CCDC58-202ENST00000460810 DTWD2Q8NBA8 298 aa6.13□□□□□ -1.43
CCDC58-202ENST00000460810 PPP1R13LQ8WUF5 828 aa6.13□□□□□ -1.43
CCDC58-202ENST00000460810 RELTQ969Z4 430 aa6.13□□□□□ -1.43
CCDC58-202ENST00000460810 ACSF2Q96CM8 615 aaPredicted RBP6.13□□□□□ -1.43
CCDC58-202ENST00000460810 INTS4Q96HW7 963 aaKnown RBP6.13□□□□□ -1.43
CCDC58-202ENST00000460810 TEX51A0A1B0GUA7 166 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 MYOCOSA0A1B0GUC4 107 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 RBAK-RBAKDNI3L0D1 243 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 LIG3P49916 1009 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 CHRNEQ04844 493 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 ZNF326Q5BKZ1 582 aaKnown RBP6.12□□□□□ -1.43
CCDC58-202ENST00000460810 FBXO33Q7Z6M2 555 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 ZNF605Q86T29 641 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 CYB5D2Q8WUJ1 264 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 FAM161BQ96MY7 647 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 MRS2Q9HD23 443 aa6.12□□□□□ -1.43
CCDC58-202ENST00000460810 RLBP1P12271 317 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 VAMP1P23763 118 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 LTKP29376 864 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 TIGD5Q53EQ6 642 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 ZNF385BQ569K4 471 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 DIEXFQ68CQ4 756 aaKnown RBP6.11□□□□□ -1.43
CCDC58-202ENST00000460810 TMEM132EQ6IEE7 984 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
CCDC58-202ENST00000460810 AK5Q9Y6K8 562 aa6.11□□□□□ -1.43
CCDC58-202ENST00000460810 DUSP4Q13115 394 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 TCERG1LQ5VWI1 586 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 TMEM151BQ8IW70 566 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 ANKS4BQ8N8V4 417 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 RNF141Q8WVD5 230 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 C8orf37Q96NL8 207 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 ZCCHC4Q9H5U6 513 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 PCDHA11Q9Y5I1 949 aa6.1□□□□□ -1.43
CCDC58-202ENST00000460810 RECKO95980 971 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 BMP7P18075 431 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 TFE3P19532 575 aaPredicted RBP6.09□□□□□ -1.43
CCDC58-202ENST00000460810 YARSP54577 528 aaKnown RBP6.09□□□□□ -1.43
CCDC58-202ENST00000460810 TMEM201Q5SNT2 666 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 CCDC84Q86UT8 332 aaPredicted RBP6.09□□□□□ -1.43
CCDC58-202ENST00000460810 DRC1Q96MC2 740 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 KCNC2Q96PR1 638 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 VTI1BQ9UEU0 232 aa6.09□□□□□ -1.43
CCDC58-202ENST00000460810 RFXAPO00287 272 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 FOXD2O60548 495 aaPredicted RBP6.08□□□□□ -1.44
CCDC58-202ENST00000460810 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
CCDC58-202ENST00000460810 PDE6BP35913 854 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 DAB2P98082 770 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 SLFN12Q8IYM2 578 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 MARCH10Q8NA82 808 aaPredicted RBP6.08□□□□□ -1.44
CCDC58-202ENST00000460810 FAM13CQ8NE31 585 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
CCDC58-202ENST00000460810 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 SHISA4Q96DD7 197 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 BCL11AQ9H165 835 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 CDK11AQ9UQ88 783 aaPredicted RBP6.08□□□□□ -1.44
CCDC58-202ENST00000460810 ZNF281Q9Y2X9 895 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 KCTD3Q9Y597 815 aa6.08□□□□□ -1.44
CCDC58-202ENST00000460810 SORBS3O60504 671 aa6.07□□□□□ -1.44
CCDC58-202ENST00000460810 PLCG1P19174 1290 aa6.07□□□□□ -1.44
CCDC58-202ENST00000460810 TEKQ02763 1124 aa6.07□□□□□ -1.44
CCDC58-202ENST00000460810 MAP3K11Q16584 847 aa6.07□□□□□ -1.44
CCDC58-202ENST00000460810 GPR160Q9UJ42 338 aa6.07□□□□□ -1.44
CCDC58-202ENST00000460810 A0A0G2JLL6 359 aaPredicted RBP6.06□□□□□ -1.44
CCDC58-202ENST00000460810 UPK3BL1B0FP48 263 aa6.06□□□□□ -1.44
CCDC58-202ENST00000460810 UPK3BL2E5RIL1 263 aa6.06□□□□□ -1.44
CCDC58-202ENST00000460810 HRKO00198 91 aa6.06□□□□□ -1.44
CCDC58-202ENST00000460810 PSPNO60542 156 aa6.06□□□□□ -1.44
CCDC58-202ENST00000460810 LRRN2O75325 713 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms