RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-209	ENST00000460628	LPAR1	Q92633	364 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	CDK5RAP2	Q96SN8	1893 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	SH2D4A	Q9H788	454 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	VCPKMT	Q9H867	229 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	ARHGEF10L	Q9HCE6	1279 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	PCDHB15	Q9Y5E8	787 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	NR2E3	Q9Y5X4	410 aa		11.22	□□□□□ -0.61
PSMD2-209	ENST00000460628	EVI5	O60447	810 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	PTPRE	P23469	700 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	FXR1	P51114	621 aa	Known RBP eCLIP	11.21	□□□□□ -0.61	2e-10	■■■■■ 28.8
PSMD2-209	ENST00000460628	CACNB2	Q08289	660 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	GRB14	Q14449	540 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	COG2	Q14746	738 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	NECAB2	Q7Z6G3	386 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	SIAH1	Q8IUQ4	282 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	OSBP2	Q969R2	916 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	STRBP	Q96SI9	672 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	OGDHL	Q9ULD0	1010 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	TMX2	Q9Y320	296 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	IVNS1ABP	Q9Y6Y0	642 aa		11.21	□□□□□ -0.61
PSMD2-209	ENST00000460628	SLC15A5	A6NIM6	579 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	WDR46	O15213	610 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	RNF113A	O15541	343 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	GPAA1	O43292	621 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	FLOT1	O75955	427 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	ZFY	P08048	801 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	EEF2	P13639	858 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	CCND3	P30281	292 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	MNX1	P50219	401 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	ATP2B2	Q01814	1243 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	MFSD14C	Q5VZR4	134 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	MB21D1	Q8N884	522 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	NBPF3	Q9H094	633 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	SPATC1L	Q9H0A9	340 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	HOXC10	Q9NYD6	342 aa		11.2	□□□□□ -0.62
PSMD2-209	ENST00000460628	MGAM	O43451	1857 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	ROBO3	Q96MS0	1386 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	TTC41P	Q6P2S7	1318 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	GSG1L2	A8MUP6	293 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628		M0R2C6	588 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	HOXC6	P09630	235 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	SBK1	Q52WX2	424 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	GIMAP6	Q6P9H5	292 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	SHCBP1	Q8NEM2	672 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	PI4K2B	Q8TCG2	481 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	ATG4C	Q96DT6	458 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	C11orf49	Q9H6J7	331 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	KANSL2	Q9H9L4	492 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	GOPC	Q9HD26	462 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	FLRT1	Q9NZU1	646 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	RBM27	Q9P2N5	1060 aa	Known RBP	11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	MYH1	P12882	1939 aa		11.19	□□□□□ -0.62
PSMD2-209	ENST00000460628	MINDY4B	A8MYZ0	360 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	ERC2	O15083	957 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	ERCC3	P19447	782 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	MX1	P20591	662 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	RASA1	P20936	1047 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	ADORA2A	P29274	412 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	DSG3	P32926	999 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	TDO2	P48775	406 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	PLS1	Q14651	629 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	STK11IP	Q8N1F8	1099 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	NPLOC4	Q8TAT6	608 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	CRBN	Q96SW2	442 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	FSD1	Q9BTV5	496 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	PRO3102	Q9H379	93 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	FBXO28	Q9NVF7	368 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	PCDH10	Q9P2E7	1040 aa		11.18	□□□□□ -0.62
PSMD2-209	ENST00000460628	PFAS	O15067	1338 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	RAD21	O60216	631 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	GNAT2	P19087	354 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	CYP2C19	P33261	490 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	LHX8	Q68G74	356 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	NCAPG2	Q86XI2	1143 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	C7orf61	Q8IZ16	206 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	SEC62	Q99442	399 aa	Known RBP	11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	MROH8	Q9H579	483 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	MKNK2	Q9HBH9	465 aa		11.17	□□□□□ -0.62
PSMD2-209	ENST00000460628	CEP290	O15078	2479 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	SALL3	Q9BXA9	1300 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	STRN	O43815	780 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	IGHA2	P01877	340 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	APP	P05067	770 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	COL6A1	P12109	1028 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	TMEM132B	Q14DG7	1078 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	FAM83B	Q5T0W9	1011 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	OLFML2B	Q68BL8	750 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	DPP9	Q86TI2	863 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	NUP88	Q99567	741 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	DDX20	Q9UHI6	824 aa	Known RBP	11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	PPP1R9A	Q9ULJ8	1098 aa		11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD2-209	ENST00000460628	LAMA3	Q16787	3333 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms