RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
SSR4-206ENST00000460616 MMP14P50281 582 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 FOXO4P98177 505 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 MICU3Q86XE3 530 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 CRACR2AQ9BSW2 395 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 ACTN4O43707 911 aaKnown RBP17.47■□□□□ 0.39
SSR4-206ENST00000460616 TOB1P50616 345 aaPredicted RBP17.47■□□□□ 0.39
SSR4-206ENST00000460616 IRAK1P51617 712 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 CDKAL1Q5VV42 579 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 FAM76AQ8TAV0 307 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 KAT2BQ92831 832 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 GDAP1L1Q96MZ0 367 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 SLF1Q9BQI6 1058 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 PUS7LQ9H0K6 701 aaKnown RBP17.47■□□□□ 0.39
SSR4-206ENST00000460616 FAM169AQ9Y6X4 670 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 RREB1Q92766 1687 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
SSR4-206ENST00000460616 BTBD18B2RXH4 712 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
SSR4-206ENST00000460616 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 KAT14Q9H8E8 782 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 LRRC4BQ9NT99 713 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 ABHD10Q9NUJ1 306 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
SSR4-206ENST00000460616 DENND2AQ9ULE3 1009 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 ARFGEF2Q9Y6D5 1785 aa17.47■□□□□ 0.39
SSR4-206ENST00000460616 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 CD44P16070 742 aaKnown RBP17.46■□□□□ 0.39
SSR4-206ENST00000460616 NTRK3Q16288 839 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 CYB5R4Q7L1T6 521 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 TRAPPC11Q7Z392 1133 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
SSR4-206ENST00000460616 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSR4-206ENST00000460616 GUCA1BQ9UMX6 200 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 UBN2Q6ZU65 1347 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 UBE2Q2LH0YL09 131 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 SH2B2O14492 632 aaPredicted RBP17.46■□□□□ 0.39
SSR4-206ENST00000460616 ZBTB43O43298 467 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 RANBP6O60518 1105 aaKnown RBP17.46■□□□□ 0.39
SSR4-206ENST00000460616 CRKLP46109 303 aaKnown RBP17.46■□□□□ 0.39
SSR4-206ENST00000460616 MNAT1P51948 309 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSR4-206ENST00000460616 MMS19Q96T76 1030 aa17.46■□□□□ 0.39
SSR4-206ENST00000460616 NUP88Q99567 741 aaPredicted RBP17.46■□□□□ 0.39
SSR4-206ENST00000460616 TARSL2A2RTX5 802 aaKnown RBP17.45■□□□□ 0.38
SSR4-206ENST00000460616 ENC1O14682 589 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 SEMA3EO15041 775 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 STARD3NLO95772 234 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 HNRNPH1P31943 449 aaKnown RBP17.45■□□□□ 0.38
SSR4-206ENST00000460616 CUL4BQ13620 913 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 NFXL1Q6ZNB6 911 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 APPBP2Q92624 585 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 SENP2Q9HC62 589 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 HDAC6Q9UBN7 1215 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 NUP188Q5SRE5 1749 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 AGPSO00116 658 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 EYA2O00167 538 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 APBA3O96018 575 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
SSR4-206ENST00000460616 INTS5Q6P9B9 1019 aaKnown RBP17.45■□□□□ 0.38
SSR4-206ENST00000460616 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 USP49Q70CQ1 688 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 SRPRBQ9Y5M8 271 aaKnown RBP17.45■□□□□ 0.38
SSR4-206ENST00000460616 SAR1BQ9Y6B6 198 aa17.45■□□□□ 0.38
SSR4-206ENST00000460616 RNF225M0QZC1 329 aaPredicted RBP17.44■□□□□ 0.38
SSR4-206ENST00000460616 ZMYND10O75800 440 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 CCT6AP40227 531 aaKnown RBP17.44■□□□□ 0.38
SSR4-206ENST00000460616 RILPL1Q5EBL4 403 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
SSR4-206ENST00000460616 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 GOLGA8AA7E2F4 631 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 PSMD14O00487 310 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 N4BP3O15049 544 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 GPAA1O43292 621 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 USP8P40818 1118 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 AFMP43652 599 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
SSR4-206ENST00000460616 PROM2Q8N271 834 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 BCAS4Q8TDM0 211 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 CXorf56Q9H5V9 222 aa17.44■□□□□ 0.38
SSR4-206ENST00000460616 CDC25AP30304 524 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 FBXW10Q5XX13 1052 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 MYL10Q9BUA6 226 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 SELENOOQ9BVL4 669 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 CSRNP2Q9H175 543 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 FAM217BQ9NTX9 383 aaPredicted RBP17.43■□□□□ 0.38
SSR4-206ENST00000460616 TRIM10Q9UDY6 481 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 PCDHB6Q9Y5E3 794 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 EPN1Q9Y6I3 576 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms