RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 VHLLQ6RSH7 139 aa7.26□□□□□ -1.25
VBP1-202ENST00000460509 CCDC144CPQ8IYA2 1237 aa7.26□□□□□ -1.25
VBP1-202ENST00000460509 HEXIM2Q96MH2 286 aaKnown RBP7.26□□□□□ -1.25
VBP1-202ENST00000460509 PHAXQ9H814 394 aaKnown RBP7.26□□□□□ -1.25
VBP1-202ENST00000460509 FAM155AB1AL88 458 aaPredicted RBP7.25□□□□□ -1.25
VBP1-202ENST00000460509 KLF4O43474 513 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 LRRN2O75325 713 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 RNF4P78317 190 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 SLC7A5Q01650 507 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 RAB33AQ14088 237 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 KIAA1211LQ6NV74 962 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 C6orf15Q6UXA7 325 aaPredicted RBP7.25□□□□□ -1.25
VBP1-202ENST00000460509 CELF2-AS1Q8N7Q2 184 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 SUCOQ9UBS9 1254 aaKnown RBP7.25□□□□□ -1.25
VBP1-202ENST00000460509 FBXL21Q9UKT6 434 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 MAPK8IP1Q9UQF2 711 aa7.25□□□□□ -1.25
VBP1-202ENST00000460509 PRR33A8MZF0 331 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 B2RBV5 119 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 C9IYK1 514 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 PMS1P54277 932 aaKnown RBP7.24□□□□□ -1.25
VBP1-202ENST00000460509 BBS9Q3SYG4 887 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 NBPF12Q5TAG4 269 aaPredicted RBP7.24□□□□□ -1.25
VBP1-202ENST00000460509 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 MICAL1Q8TDZ2 1067 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 RNF141Q8WVD5 230 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 PIM2Q9P1W9 311 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 ZNF214Q9UL59 606 aaPredicted RBP7.24□□□□□ -1.25
VBP1-202ENST00000460509 KCNH3Q9ULD8 1083 aa7.24□□□□□ -1.25
VBP1-202ENST00000460509 TGFB1P01137 390 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 ZMYM1Q5SVZ6 1142 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 FAM214BQ7L5A3 538 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 PPFIBP1Q86W92 1011 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 FAM178BQ8IXR5 827 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 MFSD4AQ8N468 514 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 ASPNQ9BXN1 380 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 LNPKQ9C0E8 428 aa7.23□□□□□ -1.25
VBP1-202ENST00000460509 IGF2BP3O00425 579 aaKnown RBP eCLIP7.22□□□□□ -1.25
VBP1-202ENST00000460509 GJB6O95452 261 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 DDR2Q16832 855 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 NBPF6Q5VWK0 638 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 DCAF15Q66K64 600 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 DPH6Q7L8W6 267 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
VBP1-202ENST00000460509 SLC51AQ86UW1 340 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 COX4I2Q96KJ9 171 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 NBPF4Q96M43 638 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 ZSWIM4Q9H7M6 989 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 U3KQE9 123 aa7.22□□□□□ -1.25
VBP1-202ENST00000460509 KIR3DL1P43629 444 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 OXCT1P55809 520 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 NCAPHQ15003 741 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 AXDND1Q5T1B0 1012 aaPredicted RBP7.21□□□□□ -1.26
VBP1-202ENST00000460509 HEATR6Q6AI08 1181 aaKnown RBP7.21□□□□□ -1.26
VBP1-202ENST00000460509 PPP1R14AQ96A00 147 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 FBXL18Q96ME1 805 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 ASCC2Q9H1I8 757 aaPredicted RBP7.21□□□□□ -1.26
VBP1-202ENST00000460509 OSBPL2Q9H1P3 480 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 SIRPGQ9P1W8 387 aa7.21□□□□□ -1.26
VBP1-202ENST00000460509 PRR19A6NJB7 356 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 CEACAM5P06731 702 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 TNK2Q07912 1038 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 AUHQ13825 339 aaKnown RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 BMS1Q14692 1282 aaKnown RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 CPSF6Q16630 551 aaKnown RBP eCLIP7.2□□□□□ -1.26
VBP1-202ENST00000460509 CLEC16AQ2KHT3 1053 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 NOL9Q5SY16 702 aaKnown RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 PLD6Q8N2A8 252 aaKnown RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 DTWD2Q8NBA8 298 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 KLHL6Q8WZ60 621 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 SMARCC1Q92922 1105 aaPredicted RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 VWCEQ96DN2 955 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 Q96M66 194 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 FGD4Q96M96 766 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 SRPK1Q96SB4 655 aaKnown RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 ZC3H7BQ9UGR2 993 aaKnown RBP7.2□□□□□ -1.26
VBP1-202ENST00000460509 PCDHB12Q9Y5F1 795 aa7.2□□□□□ -1.26
VBP1-202ENST00000460509 COL17A1Q9UMD9 1497 aaPredicted RBP7.19□□□□□ -1.26
VBP1-202ENST00000460509 FOSL1P15407 271 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 GRIK1P39086 918 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 SNW1Q13573 536 aaKnown RBP7.19□□□□□ -1.26
VBP1-202ENST00000460509 TCEAL1Q15170 157 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 C7orf61Q8IZ16 206 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 NETO1Q8TDF5 533 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 HAUS7Q99871 368 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 SUGT1Q9Y2Z0 365 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 CAPN6Q9Y6Q1 641 aa7.19□□□□□ -1.26
VBP1-202ENST00000460509 H3BS24 57 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 MEIS1O00470 390 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 EPHX1P07099 455 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 ZNF865P0CJ78 1059 aaPredicted RBP7.18□□□□□ -1.26
VBP1-202ENST00000460509 NKPD1Q17RQ9 610 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 TMC3Q7Z5M5 1100 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 ADCY4Q8NFM4 1077 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 BRF1Q92994 677 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 HSPA12BQ96MM6 686 aa7.18□□□□□ -1.26
VBP1-202ENST00000460509 DSCC1Q9BVC3 393 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms