RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CAP2P40123 477 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 SNAP47Q5SQN1 464 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 ATG14Q6ZNE5 492 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 GPRASP2Q96D09 838 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 MIR1-1HGQ9H1L0 117 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 DCP1AQ9NPI6 582 aaPredicted RBP5.46□□□□□ -1.54
RFC4-211ENST00000460408 UBP1Q9NZI7 540 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 PCDHA4Q9UN74 947 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 INPP5FQ9Y2H2 1132 aa5.46□□□□□ -1.54
RFC4-211ENST00000460408 INHBBP09529 407 aa5.45□□□□□ -1.54
RFC4-211ENST00000460408 SLBPQ14493 270 aaKnown RBP eCLIP5.45□□□□□ -1.54
RFC4-211ENST00000460408 CIAPIN1Q6FI81 312 aa5.45□□□□□ -1.54
RFC4-211ENST00000460408 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.45□□□□□ -1.54
RFC4-211ENST00000460408 FBXO27Q8NI29 283 aa5.45□□□□□ -1.54
RFC4-211ENST00000460408 ABHD4Q8TB40 342 aa5.45□□□□□ -1.54
RFC4-211ENST00000460408 KCNK12Q9HB15 430 aa5.45□□□□□ -1.54
RFC4-211ENST00000460408 TPX2Q9ULW0 747 aaKnown RBP5.45□□□□□ -1.54
RFC4-211ENST00000460408 ROBO2Q9HCK4 1378 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 TCAF2A6NFQ2 919 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 IGSF3O75054 1194 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 FGRP09769 529 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
RFC4-211ENST00000460408 GNL2Q13823 731 aaKnown RBP5.44□□□□□ -1.54
RFC4-211ENST00000460408 MPP2Q14168 576 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 SLITRK4Q8IW52 837 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 MFSD2AQ8NA29 543 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 SREK1Q8WXA9 508 aaKnown RBP5.44□□□□□ -1.54
RFC4-211ENST00000460408 ELMO3Q96BJ8 720 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 FBRSQ9HAH7 460 aa5.44□□□□□ -1.54
RFC4-211ENST00000460408 SMG5Q9UPR3 1016 aaKnown RBP5.44□□□□□ -1.54
RFC4-211ENST00000460408 ETV2O00321 342 aaPredicted RBP5.43□□□□□ -1.54
RFC4-211ENST00000460408 GFRA2O00451 464 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 SRFP11831 508 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 RAC2P15153 192 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 LMNB1P20700 586 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 SOX9P48436 509 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 CDK8P49336 464 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 RPL6Q02878 288 aaKnown RBP5.43□□□□□ -1.54
RFC4-211ENST00000460408 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 INPP5AQ14642 412 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 TTC6Q86TZ1 520 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 JARID2Q92833 1246 aaPredicted RBP5.43□□□□□ -1.54
RFC4-211ENST00000460408 UBE2FQ969M7 185 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 SPATA32Q96LK8 384 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 SLC26A8Q96RN1 970 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 MIPEPQ99797 713 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 SLAMF8Q9P0V8 285 aa5.43□□□□□ -1.54
RFC4-211ENST00000460408 CTSWP56202 376 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 ARID5AQ03989 594 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 NKG7Q16617 165 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 ZNF746Q6NUN9 644 aaPredicted RBP5.42□□□□□ -1.54
RFC4-211ENST00000460408 LRFN4Q6PJG9 635 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 REC114Q7Z4M0 266 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 MCF2L2Q86YR7 1114 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 RIN3Q8TB24 985 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 SEC16BQ96JE7 1060 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 COX4I2Q96KJ9 171 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 WNT10AQ9GZT5 417 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 GINM1Q9NU53 330 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 TMEM59LQ9UK28 342 aa5.42□□□□□ -1.54
RFC4-211ENST00000460408 DNAJC25-GNG10A0A024R161 153 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 TLR3O15455 904 aaKnown RBP5.41□□□□□ -1.54
RFC4-211ENST00000460408 HPXP02790 462 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 ESR1P03372 595 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 DNAJA1P31689 397 aaKnown RBP5.41□□□□□ -1.54
RFC4-211ENST00000460408 KIR3DL1P43629 444 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 LINC00310P59036 64 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 COL9A2Q14055 689 aaPredicted RBP5.41□□□□□ -1.54
RFC4-211ENST00000460408 SF3A1Q15459 793 aaKnown RBP5.41□□□□□ -1.54
RFC4-211ENST00000460408 CWF19L2Q2TBE0 894 aaKnown RBP5.41□□□□□ -1.54
RFC4-211ENST00000460408 RALGPS1Q5JS13 557 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 LETMD1Q6P1Q0 360 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 TMPRSS7Q7RTY8 843 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 HDXQ7Z353 690 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 MYLIPQ8WY64 445 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 KCNN1Q92952 543 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 NKD1Q969G9 470 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 PLPPR2Q96GM1 343 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 ZSWIM5Q9P217 1185 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 POLR3KQ9Y2Y1 108 aaPredicted RBP5.41□□□□□ -1.54
RFC4-211ENST00000460408 SNCAIPQ9Y6H5 919 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 PRR36Q9H6K5 1346 aa5.41□□□□□ -1.54
RFC4-211ENST00000460408 PRAMEF27A3QJZ7 478 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 NUAK1O60285 661 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 CBX7O95931 251 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 HOXA5P20719 270 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 NASPP49321 788 aaPredicted RBP5.4□□□□□ -1.54
RFC4-211ENST00000460408 ERVFC1P60507 584 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 TNK2Q07912 1038 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 SEZ6Q53EL9 994 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 WIPI1Q5MNZ9 446 aaPredicted RBP5.4□□□□□ -1.54
RFC4-211ENST00000460408 HID1Q8IV36 788 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 REXO1Q8N1G1 1221 aaKnown RBP5.4□□□□□ -1.54
RFC4-211ENST00000460408 C20orf173Q96LM9 149 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 DRC1Q96MC2 740 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 TANGO6Q9C0B7 1094 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 BRMS1Q9HCU9 246 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 EFR3BQ9Y2G0 817 aa5.4□□□□□ -1.54
RFC4-211ENST00000460408 BPNT1O95861 308 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms