RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 NOVP48745 357 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC12-204ENST00000460035 RALYLQ86SE5 291 aaKnown RBP12.8□□□□□ -0.36
CCDC12-204ENST00000460035 SPICE1Q8N0Z3 855 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 NCOA7Q8NI08 942 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 ZFYVE28Q9HCC9 887 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 IL17RBQ9NRM6 502 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 SLC45A1Q9Y2W3 748 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 TAF6LQ9Y6J9 622 aa12.8□□□□□ -0.36
CCDC12-204ENST00000460035 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
CCDC12-204ENST00000460035 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 FOXN1O15353 648 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 CRHR2Q13324 411 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 CCDC178Q5BJE1 867 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 STOX1Q6ZVD7 989 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 LRRC47Q8N1G4 583 aaKnown RBP12.79□□□□□ -0.36
CCDC12-204ENST00000460035 MKL1Q969V6 931 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 CHMP4CQ96CF2 233 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 MTMR7Q9Y216 660 aa12.79□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L15C9J2P7 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L13C9JLJ4 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L11C9JVI0 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L18D6R9N7 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L22D6RA61 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L17D6RBQ6 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L19D6RCP7 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L20D6RJB6 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
CCDC12-204ENST00000460035 CYP2C8P10632 490 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 CTCFP49711 727 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-204ENST00000460035 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP17L24Q0WX57 530 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 TSGA10IPQ3SY00 556 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-204ENST00000460035 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 LPAR1Q92633 364 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 KCNB2Q92953 911 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 TTC14Q96N46 770 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 ZSCAN10Q96SZ4 725 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-204ENST00000460035 UBAC1Q9BSL1 405 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 USP26Q9BXU7 913 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
CCDC12-204ENST00000460035 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
CCDC12-204ENST00000460035 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 F5H6K3 240 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 TOP1P11387 765 aaKnown RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 VCAM1P19320 739 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 MCCP23508 829 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 HOXA7P31268 230 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 HSPA4P34932 840 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 LBX1P52954 281 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 KLRC3Q07444 240 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 CHST3Q7LGC8 479 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 ASCC2Q9H1I8 757 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-204ENST00000460035 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
CCDC12-204ENST00000460035 ERICH2A1L162 156 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
CCDC12-204ENST00000460035 NDUFB10O96000 172 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
CCDC12-204ENST00000460035 KRT32Q14532 448 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 NOM1Q5C9Z4 860 aaKnown RBP12.76□□□□□ -0.37
CCDC12-204ENST00000460035 FAM83BQ5T0W9 1011 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 DGKHQ86XP1 1220 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-204ENST00000460035 ANKS1AQ92625 1134 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 NEK1Q96PY6 1258 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-204ENST00000460035 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
CCDC12-204ENST00000460035 GPR25O00155 361 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 PLXNB2O15031 1838 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 WDR46O15213 610 aaKnown RBP12.75□□□□□ -0.37
CCDC12-204ENST00000460035 TLR2O60603 784 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 TNKSO95271 1327 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 MCM5P33992 734 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 SART3Q15020 963 aaKnown RBP12.75□□□□□ -0.37
CCDC12-204ENST00000460035 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
CCDC12-204ENST00000460035 GMCL1P1Q8NEA9 526 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 KAT14Q9H8E8 782 aa12.75□□□□□ -0.37
CCDC12-204ENST00000460035 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms