RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 TTC6Q86TZ1 520 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 IL27Q8NEV9 243 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 FRAT1Q92837 279 aaPredicted RBP9.62□□□□□ -0.87
HPS4-207ENST00000459918 C12orf42Q96LP6 360 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 KIAA1683Q9H0B3 1180 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 BTBD7Q9P203 1132 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 PLXNA1Q9UIW2 1896 aa9.62□□□□□ -0.87
HPS4-207ENST00000459918 SPDYE16A6NNV3 312 aaPredicted RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 SEPT4O43236 478 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 PQBP1O60828 265 aaKnown RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 CYP2E1P05181 493 aaPredicted RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 HOXC6P09630 235 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 CT47B1P0C2W7 299 aaPredicted RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 RAG1P15918 1043 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 ZAP70P43403 619 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 MTX1Q13505 466 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 TNNI3KQ59H18 835 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 MAGEB6Q8N7X4 407 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 TRPV1Q8NER1 839 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 ACER1Q8TDN7 264 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 PPM1EQ8WY54 764 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 DBNDD2Q9BQY9 259 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 PDLIM7Q9NR12 457 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 FPGT-TNNI3KV9GXZ4 949 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 A0A0G2JMZ2 1700 aa9.61□□□□□ -0.87
HPS4-207ENST00000459918 SPTBN5Q9NRC6 3674 aaKnown RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 COL11A1P12107 1806 aaPredicted RBP9.61□□□□□ -0.87
HPS4-207ENST00000459918 PNMA6EA0A0J9YXQ4 647 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 IPO8O15397 1037 aaKnown RBP9.6□□□□□ -0.87
HPS4-207ENST00000459918 STRNO43815 780 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 RAD21O60216 631 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 CLTBP09497 229 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 RARBP10826 455 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 ERCC3P19447 782 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 FPGSQ05932 587 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 COG2Q14746 738 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 FAM47AQ5JRC9 791 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 PRAMEF19Q5SWL8 479 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 OLFML2BQ68BL8 750 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 POTEEQ6S8J3 1075 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 SH3RF1Q7Z6J0 888 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 RNF180Q86T96 592 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 METTL16Q86W50 562 aaKnown RBP9.6□□□□□ -0.87
HPS4-207ENST00000459918 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 MOV10L1Q9BXT6 1211 aaKnown RBP9.6□□□□□ -0.87
HPS4-207ENST00000459918 SPATC1LQ9H0A9 340 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 EHD4Q9H223 541 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 TTYH1Q9H313 450 aaPredicted RBP9.6□□□□□ -0.87
HPS4-207ENST00000459918 XPNPEP3Q9NQH7 507 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
HPS4-207ENST00000459918 HOXC10Q9NYD6 342 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
HPS4-207ENST00000459918 ZNFX1Q9P2E3 1918 aaKnown RBP9.59□□□□□ -0.87
HPS4-207ENST00000459918 APBB1O00213 710 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
HPS4-207ENST00000459918 FLOT1O75955 427 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 FCER1AP12319 257 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 TLE2Q04725 743 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 MAP3K12Q12852 859 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 LRRC41Q15345 812 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 TJAP1Q5JTD0 557 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 TATDN1Q6P1N9 297 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 LBX2Q6XYB7 198 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 MROH8Q9H579 483 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 TMEM39AQ9NV64 488 aa9.59□□□□□ -0.87
HPS4-207ENST00000459918 TMEM265A0A087WTH1 108 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 TRIM43BA6NCK2 446 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 TNFRSF10AO00220 468 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 COL9A1P20849 921 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 DNAJB2P25686 324 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 SEPT2Q15019 361 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 SPICE1Q8N0Z3 855 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 TRIM43Q96BQ3 446 aaPredicted RBP9.58□□□□□ -0.88
HPS4-207ENST00000459918 MAML3Q96JK9 1138 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
HPS4-207ENST00000459918 CCDC8Q9H0W5 538 aaPredicted RBP9.58□□□□□ -0.88
HPS4-207ENST00000459918 SH2D4AQ9H788 454 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 ARHGEF10LQ9HCE6 1279 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 MCM9Q9NXL9 1143 aa9.58□□□□□ -0.88
HPS4-207ENST00000459918 PARP14Q460N5 1801 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 DCDC2CA8MYV0 355 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 IGSF3O75054 1194 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 PGK1P00558 417 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 SHMT1P34896 483 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 RARSP54136 660 aaKnown RBP9.57□□□□□ -0.88
HPS4-207ENST00000459918 KCTD2Q14681 263 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 GRIN2CQ14957 1233 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 SNX17Q15036 470 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 CCDC174Q6PII3 467 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 AMOTL1Q8IY63 956 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 MB21D1Q8N884 522 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 SHCBP1Q8NEM2 672 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
HPS4-207ENST00000459918 TIFAQ96CG3 184 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms