RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
USP39-210ENST00000459775 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
USP39-210ENST00000459775 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 BRD1O95696 1058 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 TNNI2P48788 182 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 ATP2B2Q01814 1243 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 SCRN1Q12765 414 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 TATDN1Q6P1N9 297 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
USP39-210ENST00000459775 TMEM87BQ96K49 555 aa12.06□□□□□ -0.48
USP39-210ENST00000459775 ZNF830Q96NB3 372 aaPredicted RBP12.06□□□□□ -0.48
USP39-210ENST00000459775 GH2P01242 217 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 GUCY1A2P33402 732 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 ADD1P35611 737 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 SEPT2Q15019 361 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 APOA5Q6Q788 366 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 KRT26Q7Z3Y9 468 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 METTL16Q86W50 562 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 NEDD1Q8NHV4 660 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 NUP133Q8WUM0 1156 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 UBE2Q2LH0YL09 131 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 JAK2O60674 1132 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 CDC27P30260 824 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 TNFAIP1Q13829 316 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 ANKRD1Q15327 319 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 MOB2Q70IA6 237 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 SIAH1Q8IUQ4 282 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 CCDC82Q8N4S0 544 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
USP39-210ENST00000459775 SWAP70Q9UH65 585 aa12.05□□□□□ -0.48
USP39-210ENST00000459775 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 ERICH2A1L162 156 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 CCDC69A6NI79 296 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 TRAF5O00463 557 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 INPP5BP32019 993 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 MCM2P49736 904 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 IRX3P78415 501 aaPredicted RBP12.04□□□□□ -0.48
USP39-210ENST00000459775 HSP90AA2PQ14568 343 aaPredicted RBP12.04□□□□□ -0.48
USP39-210ENST00000459775 SART3Q15020 963 aaKnown RBP12.04□□□□□ -0.48
USP39-210ENST00000459775 TSHZ1Q6ZSZ6 1077 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
USP39-210ENST00000459775 TMEM47Q9BQJ4 181 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 CLIP2Q9UDT6 1046 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 PHF20L1A8MW92 1017 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 CTDNEP1O95476 244 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 LIFRP42702 1097 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 EVCP57679 992 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 CUL4AQ13619 759 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 SGMS1Q86VZ5 419 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 SULF1Q8IWU6 871 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 FBXL16Q8N461 479 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 ZKSCAN4Q969J2 545 aaPredicted RBP12.04□□□□□ -0.48
USP39-210ENST00000459775 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 CPVLQ9H3G5 476 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
USP39-210ENST00000459775 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
USP39-210ENST00000459775 SSC5DA1L4H1 1573 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 IGKV6D-41A0A0C4DH26 115 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 ZBTB43O43298 467 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 PFKFB2O60825 505 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 FOSBP53539 338 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 PKP1Q13835 747 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 GTF3C6Q969F1 213 aa12.03□□□□□ -0.48
USP39-210ENST00000459775 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
USP39-210ENST00000459775 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.48
USP39-210ENST00000459775 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.48
USP39-210ENST00000459775 PSEN1P49768 467 aa12.02□□□□□ -0.48
USP39-210ENST00000459775 DGKZQ13574 1117 aa12.02□□□□□ -0.48
USP39-210ENST00000459775 ACER1Q8TDN7 264 aa12.02□□□□□ -0.48
USP39-210ENST00000459775 ZNF274Q96GC6 653 aaPredicted RBP12.02□□□□□ -0.48
USP39-210ENST00000459775 ZSCAN31Q96LW9 406 aaPredicted RBP12.02□□□□□ -0.48
USP39-210ENST00000459775 MCOLN1Q9GZU1 580 aa12.02□□□□□ -0.48
USP39-210ENST00000459775 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.48
USP39-210ENST00000459775 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.49
USP39-210ENST00000459775 hCG_1642624A0A1W2PR95 340 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 A0A1W2PRG0 241 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.492e-7■■■□□ 16.1
USP39-210ENST00000459775 TROAPQ12815 778 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 CYP4F22Q6NT55 531 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 STAG2Q8N3U4 1231 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 PNMA1Q8ND90 353 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 PHKBQ93100 1093 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 KAT14Q9H8E8 782 aa12.02□□□□□ -0.49
USP39-210ENST00000459775 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
USP39-210ENST00000459775 SH3BP1Q9Y3L3 701 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms