RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 CCAR1Q8IX12 1150 aaKnown RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 LPIN2Q92539 896 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 ZNF512BQ96KM6 892 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 VCPKMTQ9H867 229 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 LIN7AO14910 233 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 IKBKBO14920 756 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 FANCGO15287 622 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 CAND2O75155 1236 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 SLC5A1P13866 664 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 BCAS4Q8TDM0 211 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 IL25Q9H293 177 aa12.79□□□□□ -0.36
DDX39B-214ENST00000458640 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-214ENST00000458640 AHCYL1O43865 530 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 UQCRFS1P1P0C7P4 283 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 ACTN3Q08043 901 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-214ENST00000458640 WHAMMP3Q1A5X7 153 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 CCDC40Q4G0X9 1142 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 CCDC73Q6ZRK6 1079 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 APLFQ8IW19 511 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-214ENST00000458640 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 CD248Q9HCU0 757 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 A0A0D9SFI3 127 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 ANKRD1Q15327 319 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 IGSF22Q8N9C0 903 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 FAM227BQ96M60 508 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 OSBPL9Q96SU4 736 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 IFNKQ9P0W0 207 aa12.78□□□□□ -0.36
DDX39B-214ENST00000458640 MYH7P12883 1935 aa12.77□□□□□ -0.36
DDX39B-214ENST00000458640 PLSCR1O15162 318 aa12.77□□□□□ -0.37
DDX39B-214ENST00000458640 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-214ENST00000458640 IMPDH2P12268 514 aa12.77□□□□□ -0.37
DDX39B-214ENST00000458640 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-214ENST00000458640 ADORA1P30542 326 aa12.77□□□□□ -0.37
DDX39B-214ENST00000458640 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-214ENST00000458640 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
DDX39B-214ENST00000458640 SDCCAG8Q86SQ7 713 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-214ENST00000458640 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
DDX39B-214ENST00000458640 DHX58Q96C10 678 aa12.77□□□□□ -0.37
DDX39B-214ENST00000458640 EDC3Q96F86 508 aaKnown RBP12.77□□□□□ -0.37
DDX39B-214ENST00000458640 GOLGA8KD6RF30 607 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 FESP07332 822 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 SKOR1P84550 965 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDX39B-214ENST00000458640 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 WDR24Q96S15 920 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.373e-10■□□□□ 10.4
DDX39B-214ENST00000458640 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
DDX39B-214ENST00000458640 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
DDX39B-214ENST00000458640 FGFR2P21802 821 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 RAB27AP51159 221 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 TBC1D25Q3MII6 688 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 MCMDC2Q4G0Z9 681 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
DDX39B-214ENST00000458640 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 PNKPQ96T60 521 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 SH3GL2Q99962 352 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
DDX39B-214ENST00000458640 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-214ENST00000458640 MYO1FO00160 1098 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 CDKL5O76039 1030 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 RTN3O95197 1032 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-214ENST00000458640 GBP2P32456 591 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-214ENST00000458640 NAA25Q14CX7 972 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC12Q8WUD4 166 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-214ENST00000458640 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 PLEKHA4Q9H4M7 779 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 KAT14Q9H8E8 782 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 HMG20BQ9P0W2 317 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 RCOR1Q9UKL0 485 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 NDUFB9Q9Y6M9 179 aa12.75□□□□□ -0.37
DDX39B-214ENST00000458640 AKAP11Q9UKA4 1901 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CTAGE15A4D2H0 777 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 GOLGA6CA6NDK9 693 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 GOLGA6DP0CG33 693 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CTAGE8P0CG41 777 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CHRNDQ07001 517 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 STIM1Q13586 685 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 NFIXQ14938 502 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms