RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DACT2Q5SW24 774 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 CLEC17AQ6ZS10 378 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 TTC6Q86TZ1 520 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 SGMS1Q86VZ5 419 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 FAM184AQ8NB25 1140 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 TNPO1Q92973 898 aaKnown RBP10.45□□□□□ -0.74
VPS50-207ENST00000458530 ZDHHC15Q96MV8 337 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 HS3ST6Q96QI5 342 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 SERPINA10Q9UK55 444 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 KIAA0100Q14667 2235 aaKnown RBP10.45□□□□□ -0.74
VPS50-207ENST00000458530 TCHHQ07283 1943 aa10.45□□□□□ -0.74
VPS50-207ENST00000458530 RBBP6Q7Z6E9 1792 aaKnown RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 NID2Q14112 1375 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 F8W031 263 aaPredicted RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 ZBTB43O43298 467 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 STX6O43752 255 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 RANBP6O60518 1105 aaKnown RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 BRD1O95696 1058 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 HLA-DOAP06340 250 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 CALM1P0DP23 149 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 CALM2P0DP24 149 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 CALM3P0DP25 149 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 CRKP46108 304 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 METAP2P50579 478 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS50-207ENST00000458530 GRIK5Q16478 980 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 RBM26Q5T8P6 1007 aaKnown RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 ANGEL2Q5VTE6 544 aaKnown RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 CYB5R4Q7L1T6 521 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 CERS5Q8N5B7 392 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 AGBL3Q8NEM8 1001 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
VPS50-207ENST00000458530 R3HDMLQ9H3Y0 253 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 MKNK2Q9HBH9 465 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 TMOD2Q9NZR1 351 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 ZSWIM5Q9P217 1185 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS50-207ENST00000458530 SLC12A7Q9Y666 1083 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 CEP290O15078 2479 aa10.44□□□□□ -0.74
VPS50-207ENST00000458530 COL2A1P02458 1487 aaPredicted RBP10.43□□□□□ -0.74
VPS50-207ENST00000458530 TSPY2A6NKD2 308 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 RBM5P52756 815 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS50-207ENST00000458530 RHBDL3P58872 404 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 SCRN1Q12765 414 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 NBR1Q14596 966 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
VPS50-207ENST00000458530 APOA5Q6Q788 366 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 MAPKAPK5Q8IW41 473 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 OGFOD1Q8N543 542 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 LY9Q9HBG7 655 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 USP40Q9NVE5 1235 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 BRCA2P51587 3418 aa10.43□□□□□ -0.74
VPS50-207ENST00000458530 TNKSO95271 1327 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 TRIOBPQ9H2D6 2365 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 PTPDC1A2A3K4 754 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 H3BQV1 296 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 USP17L8P0C7I0 530 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 ZSCAN22P10073 491 aaPredicted RBP10.42□□□□□ -0.74
VPS50-207ENST00000458530 SYT1P21579 422 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 MCM4P33991 863 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 CSPP1Q1MSJ5 1256 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 IFIT1BQ5T764 474 aaKnown RBP10.42□□□□□ -0.74
VPS50-207ENST00000458530 LARP1BQ659C4 914 aaKnown RBP10.42□□□□□ -0.74
VPS50-207ENST00000458530 C16orf86Q6ZW13 317 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 MOB2Q70IA6 237 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 CATIPQ7Z7H3 387 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 ZNF444Q8N0Y2 327 aaPredicted RBP10.42□□□□□ -0.74
VPS50-207ENST00000458530 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 IGDCC4Q8TDY8 1250 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 WASF1Q92558 559 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 KHSRPQ92945 711 aaKnown RBP eCLIP10.42□□□□□ -0.742e-7■■■■□ 23.4
VPS50-207ENST00000458530 ZSCAN10Q96SZ4 725 aaPredicted RBP10.42□□□□□ -0.74
VPS50-207ENST00000458530 DHX36Q9H2U1 1008 aaKnown RBP10.42□□□□□ -0.74
VPS50-207ENST00000458530 SWAP70Q9UH65 585 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 MYH4Q9Y623 1939 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 SZT2Q5T011 3432 aa10.42□□□□□ -0.74
VPS50-207ENST00000458530 CYP2D7A0A087X1C5 515 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 VPS37CA5D8V6 355 aaPredicted RBP10.41□□□□□ -0.74
VPS50-207ENST00000458530 FKTNO75072 461 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 DDAH1O94760 285 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 TSPY3P0CV98 308 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 TSPY8P0CW00 308 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 CCT2P78371 535 aaKnown RBP10.41□□□□□ -0.74
VPS50-207ENST00000458530 ST3GAL1Q11201 340 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 COL9A3Q14050 684 aaPredicted RBP10.41□□□□□ -0.74
VPS50-207ENST00000458530 SKOR2Q2VWA4 1001 aaPredicted RBP10.41□□□□□ -0.74
VPS50-207ENST00000458530 MICU3Q86XE3 530 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 NSUN7Q8NE18 718 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms