RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC192P0DO97 292 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 CASTP20810 708 aaKnown RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 PSMD7P51665 324 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 GSDMDP57764 484 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 LMNB2Q03252 620 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 DEUP1Q05D60 604 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 TUBB2AQ13885 445 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 BRD3Q15059 726 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 ELF2Q15723 593 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 PCSK7Q16549 785 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC57Q2TAC2 916 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 FBLN7Q53RD9 439 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 WLSQ5T9L3 541 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 ANKRD45Q5TZF3 282 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 NFXL1Q6ZNB6 911 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 Q6ZS46 218 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 SEPT14Q6ZU15 432 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 CCDC80Q76M96 950 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 LUZP1Q86V48 1076 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 IQCA1Q86XH1 822 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 TRMT2AQ8IZ69 625 aaKnown RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 SAMD3Q8N6K7 520 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 NFATC2IPQ8NCF5 419 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 TDRD7Q8NHU6 1098 aaKnown RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 GTF3C6Q969F1 213 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 MPHOSPH6Q99547 160 aaKnown RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 TUBB2BQ9BVA1 445 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 SMG9Q9H0W8 520 aaKnown RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 RMI1Q9H9A7 625 aa6.4□□□□□ -1.38
HMGB4-202ENST00000458277 ZNF215Q9UL58 517 aaPredicted RBP6.4□□□□□ -1.38
HMGB4-202ENST00000458277 ABCA8O94911 1581 aa6.4□□□□□ -1.39
HMGB4-202ENST00000458277 PCF11O94913 1555 aaKnown RBP6.4□□□□□ -1.39
HMGB4-202ENST00000458277 PTPN23Q9H3S7 1636 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 ZBTB42B2RXF5 422 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 OPA1O60313 960 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 E2F6O75461 281 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 KIAA0754O94854 1291 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 VCAM1P19320 739 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 CHMLP26374 656 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 INPP5BP32019 993 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 CLNS1AP54105 237 aaKnown RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 GTF2IP78347 998 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 SLFN5Q08AF3 891 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 VAC14Q08AM6 782 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 SCRN1Q12765 414 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 DRP2Q13474 957 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 DCTN1Q14203 1278 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 IQCB1Q15051 598 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 WDR43Q15061 677 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC178Q5BJE1 867 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 TTC19Q6DKK2 380 aaPredicted RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 HDXQ7Z353 690 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 FAM114A1Q8IWE2 563 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 TRIM42Q8IWZ5 723 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 MAB21L3Q8N8X9 362 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 PRPF38AQ8NAV1 312 aaKnown RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 TMEM87AQ8NBN3 555 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 FAM71BQ8TC56 605 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 MICAL1Q8TDZ2 1067 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 HNRNPLLQ8WVV9 542 aaKnown RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 JARID2Q92833 1246 aaPredicted RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 TEKT1Q969V4 418 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 JAKMIP2Q96AA8 810 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 PPP1R14BQ96C90 147 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 ASIC4Q96FT7 647 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 C16orf45Q96MC5 204 aaPredicted RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 PLEKHG4BQ96PX9 1271 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 TRPV5Q9NQA5 729 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 RGL1Q9NZL6 768 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 BLOC1S6Q9UL45 172 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 CHMP3Q9Y3E7 222 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 NUP153P49790 1475 aaKnown RBP6.39□□□□□ -1.39
HMGB4-202ENST00000458277 ADCY10Q96PN6 1610 aa6.39□□□□□ -1.39
HMGB4-202ENST00000458277 GOLGA6L7A0A1B0GV03 622 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 SHTN1A0MZ66 631 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 HMX2A2RU54 273 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC151A5D8V7 595 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 IPO5O00410 1097 aaKnown RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 CEP104O60308 925 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 RTN2O75298 545 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 FESP07332 822 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 MCM3P25205 808 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 RBM5P52756 815 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 INHBEP58166 350 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 DYNC1I2Q13409 638 aaKnown RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 SLC4A8Q2Y0W8 1093 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 ARHGAP29Q52LW3 1261 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 LRRC23Q53EV4 343 aaPredicted RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 BMP2KLQ5H9B9 411 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 RNF43Q68DV7 783 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 HFE2Q6ZVN8 426 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 KRT25Q7Z3Z0 450 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 SPATA21Q7Z572 469 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 SKAP1Q86WV1 359 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 DRC7Q8IY82 874 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms