RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 SYCP2Q9BX26 1530 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 KCNK3O14649 394 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 BAIAP2L1Q9UHR4 511 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 FAM98CQ17RN3 349 aaKnown RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 AZI2Q9H6S1 392 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 RFC1P35251 1148 aaPredicted RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 ADCY1Q08828 1119 aa21.74■■□□□ 1.07
SNX27-204ENST00000458013 LRRC47Q8N1G4 583 aaKnown RBP21.74■■□□□ 1.07
SNX27-204ENST00000458013 KRT81Q14533 505 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 CCDC13Q8IYE1 715 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 GIPC1O14908 333 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 THRAP3Q9Y2W1 955 aaKnown RBP21.73■■□□□ 1.07
SNX27-204ENST00000458013 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 RSAD2Q8WXG1 361 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 VCX3BQ9H321 246 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 SH2D4AQ9H788 454 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 PARD3Q8TEW0 1356 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 ERCC6LQ2NKX8 1250 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 NAA35Q5VZE5 725 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 PTPN22Q9Y2R2 807 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 GPBP1Q86WP2 473 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 GSDMBQ8TAX9 411 aa21.73■■□□□ 1.07
SNX27-204ENST00000458013 SMCO2A6NFE2 343 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 BAG2O95816 211 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 SCNN1DP51172 638 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 PALM2Q8IXS6 379 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 CABS1Q96KC9 395 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 DDX41Q9UJV9 622 aaKnown RBP21.72■■□□□ 1.07
SNX27-204ENST00000458013 YTHDC2Q9H6S0 1430 aaKnown RBP21.72■■□□□ 1.07
SNX27-204ENST00000458013 ARHGAP42A6NI28 874 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 ZBED4O75132 1171 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 KDRP35968 1356 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 SPDYE16A6NNV3 312 aaPredicted RBP21.72■■□□□ 1.07
SNX27-204ENST00000458013 KCNJ18B7U540 433 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 IFNB1P01574 187 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 KCNJ12Q14500 433 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 KRT71Q3SY84 523 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 SPDYE2Q495Y8 402 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 KRT12Q99456 494 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 LARGE2Q8N3Y3 721 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 MMS19Q96T76 1030 aa21.72■■□□□ 1.07
SNX27-204ENST00000458013 TCP10L2B9ZVM9 353 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 CFAP221Q4G0U5 840 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 TRIM35Q9UPQ4 493 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 ATF7P17544 494 aaPredicted RBP21.71■■□□□ 1.07
SNX27-204ENST00000458013 PTH1RQ03431 593 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 PRR16Q569H4 304 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 SCYL1Q96KG9 808 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 NUP58Q9BVL2 599 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 BZW2Q9Y6E2 419 aaKnown RBP21.71■■□□□ 1.07
SNX27-204ENST00000458013 MORC3Q14149 939 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 LMBRD1Q9NUN5 540 aa21.71■■□□□ 1.07
SNX27-204ENST00000458013 CTNNA1P35221 906 aaKnown RBP21.71■■□□□ 1.07
SNX27-204ENST00000458013 GNGT1P63211 74 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 PPARAQ07869 468 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.7■■□□□ 1.06
SNX27-204ENST00000458013 BCRP11274 1271 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 IGBP1P78318 339 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 HS1BP3Q53T59 392 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 TMEM63CQ9P1W3 806 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 KIF3CO14782 793 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 PFKFB1P16118 471 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 YARSP54577 528 aaKnown RBP21.7■■□□□ 1.06
SNX27-204ENST00000458013 KIF22Q14807 665 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 DOK7Q18PE1 504 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 CARD10Q9BWT7 1032 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 BIRC2Q13490 618 aa21.7■■□□□ 1.06
SNX27-204ENST00000458013 MAPKBP1O60336 1514 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 UBXN2AP68543 259 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 POLR3AO14802 1390 aaPredicted RBP21.69■■□□□ 1.06
SNX27-204ENST00000458013 SGSM2O43147 1006 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 PAK2Q13177 524 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 PHLDB2Q86SQ0 1253 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 MLKLQ8NB16 471 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 TRPM2O94759 1503 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 IL1RL1Q01638 556 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 KMT5BQ4FZB7 885 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 FAM47CQ5HY64 1035 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 ARHGEF16Q5VV41 709 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 CDAN1Q8IWY9 1227 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 PPME1Q9Y570 386 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 IVNS1ABPQ9Y6Y0 642 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 A0A087WWV3 80 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 USP40Q9NVE5 1235 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 ADCY8P40145 1251 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 FOXD4Q12950 439 aaPredicted RBP21.69■■□□□ 1.06
SNX27-204ENST00000458013 TSTA3Q13630 321 aaPredicted RBP21.69■■□□□ 1.06
SNX27-204ENST00000458013 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 MYRIPQ8NFW9 859 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 EFCC1Q9HA90 598 aa21.69■■□□□ 1.06
SNX27-204ENST00000458013 PTPRKQ15262 1439 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 TOM1O60784 492 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 STX2P32856 288 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 PKP1Q13835 747 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 SLC39A2Q9NP94 309 aa21.68■■□□□ 1.06
SNX27-204ENST00000458013 DLATP10515 647 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms