RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 HMGCRP04035 888 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 XRCC5P13010 732 aaKnown RBP14.84□□□□□ -0.03
VEGFA-210ENST00000457104 CYP2B6P20813 491 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 ICA1Q05084 483 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 TRIB2Q92519 343 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 GCC1Q96CN9 775 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 DEFB118Q96PH6 123 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 NUDT12Q9BQG2 462 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 STAP2Q9UGK3 403 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 DNAH12Q6ZR08 3092 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 FRMPD3Q5JV73 1810 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 CEP290O15078 2479 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 ROBO3Q96MS0 1386 aa14.84□□□□□ -0.03
VEGFA-210ENST00000457104 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
VEGFA-210ENST00000457104 COG2Q14746 738 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 ZMYM1Q5SVZ6 1142 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 MAP3K21Q5TCX8 1036 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 PLEKHH3Q7Z736 793 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 SOCS4Q8WXH5 440 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 LPAR1Q92633 364 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 VCPKMTQ9H867 229 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 ARHGEF10LQ9HCE6 1279 aa14.83□□□□□ -0.04
VEGFA-210ENST00000457104 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 MINDY4BA8MYZ0 360 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
VEGFA-210ENST00000457104 GNAT2P19087 354 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 RASA1P20936 1047 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 AAMPQ13685 434 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 SPICE1Q8N0Z3 855 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 FSD1Q9BTV5 496 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 TANGO6Q9C0B7 1094 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■■□ 25.9
VEGFA-210ENST00000457104 KANSL2Q9H9L4 492 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 HOXC10Q9NYD6 342 aa14.82□□□□□ -0.04
VEGFA-210ENST00000457104 FOXP2O15409 715 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 PTPREP23469 700 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 PDE1AP54750 535 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 CCNA1P78396 465 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 CCL14Q16627 93 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
VEGFA-210ENST00000457104 CCAR1Q8IX12 1150 aaKnown RBP14.81□□□□□ -0.04
VEGFA-210ENST00000457104 IFNL3Q8IZI9 196 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 SH2D4AQ9H788 454 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 RPTORQ8N122 1335 aa14.81□□□□□ -0.04
VEGFA-210ENST00000457104 PLXNA1Q9UIW2 1896 aa14.8□□□□□ -0.04
VEGFA-210ENST00000457104 WDR46O15213 610 aaKnown RBP14.8□□□□□ -0.04
VEGFA-210ENST00000457104 FARP2O94887 1054 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-210ENST00000457104 TFRCP02786 760 aaKnown RBP14.8□□□□□ -0.04
VEGFA-210ENST00000457104 APPP05067 770 aa14.8□□□□□ -0.04
VEGFA-210ENST00000457104 DSG3P32926 999 aa14.8□□□□□ -0.04
VEGFA-210ENST00000457104 RGS2P41220 211 aa14.8□□□□□ -0.04
VEGFA-210ENST00000457104 MAP2K5Q13163 448 aa14.8□□□□□ -0.04
VEGFA-210ENST00000457104 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
VEGFA-210ENST00000457104 MOV10L1Q9BXT6 1211 aaKnown RBP14.8□□□□□ -0.04
VEGFA-210ENST00000457104 HMX1Q9NP08 348 aaPredicted RBP14.8□□□□□ -0.04
VEGFA-210ENST00000457104 IGKV6D-41A0A0C4DH26 115 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 SLC15A5A6NIM6 579 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 SLC34A2O95436 690 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 IGHDP01880 384 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
VEGFA-210ENST00000457104 CAPN2P17655 700 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 TDO2P48775 406 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-210ENST00000457104 GRB14Q14449 540 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 TRMT44Q8IYL2 757 aaKnown RBP14.79□□□□□ -0.04
VEGFA-210ENST00000457104 EXOC6Q8TAG9 804 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 ATG4CQ96DT6 458 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 APBA2Q99767 749 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 SPATC1LQ9H0A9 340 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 FLRT1Q9NZU1 646 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 ADAMTS5Q9UNA0 930 aa14.79□□□□□ -0.04
VEGFA-210ENST00000457104 H0YGN5 161 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 FLOT1O75955 427 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 IGHA2P01877 340 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 HOXC6P09630 235 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-210ENST00000457104 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-210ENST00000457104 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 MB21D1Q8N884 522 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 EVI5LQ96CN4 794 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 FBXO28Q9NVF7 368 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 NYAP2Q9P242 653 aa14.78□□□□□ -0.04
VEGFA-210ENST00000457104 ZBTB47Q9UFB7 747 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-210ENST00000457104 PRDM1O75626 825 aa14.77□□□□□ -0.05
VEGFA-210ENST00000457104 TMEM132BQ14DG7 1078 aa14.77□□□□□ -0.05
VEGFA-210ENST00000457104 SHCBP1Q8NEM2 672 aa14.77□□□□□ -0.05
VEGFA-210ENST00000457104 NPLOC4Q8TAT6 608 aa14.77□□□□□ -0.05
VEGFA-210ENST00000457104 DIS3LQ8TF46 1054 aaKnown RBP14.77□□□□□ -0.05
VEGFA-210ENST00000457104 PAWRQ96IZ0 340 aaKnown RBP14.77□□□□□ -0.05
VEGFA-210ENST00000457104 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-210ENST00000457104 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.05
VEGFA-210ENST00000457104 GOPCQ9HD26 462 aa14.77□□□□□ -0.05
VEGFA-210ENST00000457104 IVNS1ABPQ9Y6Y0 642 aa14.77□□□□□ -0.05
VEGFA-210ENST00000457104 RANBP2P49792 3224 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms