RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 ZNF512BQ96KM6 892 aaPredicted RBP16.29■□□□□ 0.2
EPCAM-204ENST00000456133 TRIM43BA6NCK2 446 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 SEPT4O43236 478 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 IGSF3O75054 1194 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 COBLO75128 1261 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 IDH1O75874 414 aaKnown RBP16.29■□□□□ 0.2
EPCAM-204ENST00000456133 FOSL2P15408 326 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 GUCY1A2P33402 732 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 SHMT1P34896 483 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 TRIM43Q96BQ3 446 aaPredicted RBP16.29■□□□□ 0.2
EPCAM-204ENST00000456133 MYO9BQ13459 2157 aa16.29■□□□□ 0.2
EPCAM-204ENST00000456133 TTC28Q96AY4 2481 aa16.28■□□□□ 0.2
EPCAM-204ENST00000456133 STRNO43815 780 aa16.28■□□□□ 0.2
EPCAM-204ENST00000456133 SEPT2Q15019 361 aa16.28■□□□□ 0.2
EPCAM-204ENST00000456133 LRRC41Q15345 812 aa16.28■□□□□ 0.2
EPCAM-204ENST00000456133 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
EPCAM-204ENST00000456133 TRIM27P14373 513 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 ERCC3P19447 782 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 PLCD1P51178 756 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 TLE2Q04725 743 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 POLA2Q14181 598 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 COG2Q14746 738 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 SPATC1LQ9H0A9 340 aa16.27■□□□□ 0.2
EPCAM-204ENST00000456133 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.2
EPCAM-204ENST00000456133 DBNLQ9UJU6 430 aaKnown RBP16.27■□□□□ 0.2
EPCAM-204ENST00000456133 A0A1W2PRG0 241 aa16.26■□□□□ 0.19
EPCAM-204ENST00000456133 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
EPCAM-204ENST00000456133 CERS3Q8IU89 383 aa16.26■□□□□ 0.19
EPCAM-204ENST00000456133 SHCBP1Q8NEM2 672 aa16.26■□□□□ 0.19
EPCAM-204ENST00000456133 TANGO6Q9C0B7 1094 aa16.26■□□□□ 0.19
EPCAM-204ENST00000456133 CCDC8Q9H0W5 538 aaPredicted RBP16.26■□□□□ 0.19
EPCAM-204ENST00000456133 HOXC10Q9NYD6 342 aa16.26■□□□□ 0.19
EPCAM-204ENST00000456133 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
EPCAM-204ENST00000456133 ITGB8P26012 769 aa16.25■□□□□ 0.19
EPCAM-204ENST00000456133 EPHB4P54760 987 aa16.25■□□□□ 0.19
EPCAM-204ENST00000456133 SYMPKQ92797 1274 aaKnown RBP16.25■□□□□ 0.19
EPCAM-204ENST00000456133 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
EPCAM-204ENST00000456133 RNPC3Q96LT9 517 aaKnown RBP16.25■□□□□ 0.19
EPCAM-204ENST00000456133 MPHOSPH10O00566 681 aaKnown RBP16.24■□□□□ 0.19
EPCAM-204ENST00000456133 IPO8O15397 1037 aaKnown RBP16.24■□□□□ 0.19
EPCAM-204ENST00000456133 PLS1Q14651 629 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 NCAPG2Q86XI2 1143 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 SSH3Q8TE77 659 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
EPCAM-204ENST00000456133 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 BAZ2AQ9UIF9 1905 aaKnown RBP16.24■□□□□ 0.19
EPCAM-204ENST00000456133 BCAR3O75815 825 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
EPCAM-204ENST00000456133 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 EVX2Q03828 476 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 MAML3Q96JK9 1138 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 MROH8Q9H579 483 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 PHF24Q9UPV7 400 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
EPCAM-204ENST00000456133 TMEM265A0A087WTH1 108 aa16.23■□□□□ 0.19
EPCAM-204ENST00000456133 CLTBP09497 229 aa16.23■□□□□ 0.19
EPCAM-204ENST00000456133 DSG3P32926 999 aa16.23■□□□□ 0.19
EPCAM-204ENST00000456133 GABPAQ06546 454 aa16.23■□□□□ 0.19
EPCAM-204ENST00000456133 USP38Q8NB14 1042 aa16.23■□□□□ 0.19
EPCAM-204ENST00000456133 EAF2Q96CJ1 260 aaPredicted RBP16.23■□□□□ 0.19
EPCAM-204ENST00000456133 RAG1P15918 1043 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 GRIN2CQ14957 1233 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
EPCAM-204ENST00000456133 ABRAQ8N0Z2 381 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 TMEM57Q8N5G2 664 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 MB21D1Q8N884 522 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 RIOK1Q9BRS2 568 aaKnown RBP16.22■□□□□ 0.19
EPCAM-204ENST00000456133 XPNPEP3Q9NQH7 507 aa16.22■□□□□ 0.19
EPCAM-204ENST00000456133 KIAA0355O15063 1070 aa16.21■□□□□ 0.19
EPCAM-204ENST00000456133 PGK1P00558 417 aa16.21■□□□□ 0.19
EPCAM-204ENST00000456133 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
EPCAM-204ENST00000456133 MAGEB6P1A0A0J9YX57 407 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 PQBP1O60828 265 aaKnown RBP16.2■□□□□ 0.18
EPCAM-204ENST00000456133 FLOT1O75955 427 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 RARBP10826 455 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 FCER1AP12319 257 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 FPGSQ05932 587 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 TJAP1Q5JTD0 557 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 RNF180Q86T96 592 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 MCM9Q9NXL9 1143 aa16.2■□□□□ 0.18
EPCAM-204ENST00000456133 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
EPCAM-204ENST00000456133 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
EPCAM-204ENST00000456133 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 DNAJB2P25686 324 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 CLEC10AQ8IUN9 316 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 SLC44A5Q8NCS7 719 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 MCM3APO60318 1980 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 GBF1Q92538 1859 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.19■□□□□ 0.18
EPCAM-204ENST00000456133 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.19■□□□□ 0.18
EPCAM-204ENST00000456133 CYP2D6P10635 497 aa16.19■□□□□ 0.18
EPCAM-204ENST00000456133 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms