RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 IGKV6D-41A0A0C4DH26 115 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
ATXN3-205ENST00000454964 KDM4AO75164 1064 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 PRDM1O75626 825 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 EEF2P13639 858 aaKnown RBP11.14□□□□□ -0.63
ATXN3-205ENST00000454964 LIFRP42702 1097 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-205ENST00000454964 FGD1P98174 961 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 JMYQ8N9B5 988 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 PARK7Q99497 189 aaKnown RBP11.14□□□□□ -0.63
ATXN3-205ENST00000454964 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 VCPKMTQ9H867 229 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 KAT14Q9H8E8 782 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 ZFYVE28Q9HCC9 887 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 AGTPBP1Q9UPW5 1226 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 CYP46A1Q9Y6A2 500 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 B4E1Z4 1266 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
ATXN3-205ENST00000454964 PLA2G6O60733 806 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 GRM1Q13255 1194 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 WTAPQ15007 396 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 FAM47AQ5JRC9 791 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 GPATCH4Q5T3I0 446 aaKnown RBP11.13□□□□□ -0.63
ATXN3-205ENST00000454964 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
ATXN3-205ENST00000454964 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 DCAF4Q8WV16 495 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 CEP95Q96GE4 821 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 IL25Q9H293 177 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 FZD1Q9UP38 647 aa11.13□□□□□ -0.63
ATXN3-205ENST00000454964 F5H6K3 240 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 GUCY1A2P33402 732 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 GNAQP50148 359 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 RCAN1P53805 252 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 HMGCS2P54868 508 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
ATXN3-205ENST00000454964 KLRC3Q07444 240 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 MTMR2Q13614 643 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 RRP1BQ14684 758 aaKnown RBP11.12□□□□□ -0.63
ATXN3-205ENST00000454964 COG2Q14746 738 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 TBC1D10CQ8IV04 446 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 STK11IPQ8N1F8 1099 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 MAF1Q9H063 256 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
ATXN3-205ENST00000454964 FEM1BQ9UK73 627 aa11.12□□□□□ -0.63
ATXN3-205ENST00000454964 CCDC196A0A1B0GTZ2 297 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 CCDC69A6NI79 296 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 PDHXO00330 501 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 GNRH1P01148 92 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 SMARCA1P28370 1054 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 KIF5BP33176 963 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 COPB2P35606 906 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 CCNA1P78396 465 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 KIF22Q14807 665 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 C8orf34Q49A92 452 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 PRPF38AQ8NAV1 312 aaKnown RBP11.11□□□□□ -0.63
ATXN3-205ENST00000454964 SMCR8Q8TEV9 937 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-205ENST00000454964 LZTS2Q9BRK4 669 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATXN3-205ENST00000454964 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-205ENST00000454964 CTDP1Q9Y5B0 961 aaPredicted RBP11.11□□□□□ -0.63
ATXN3-205ENST00000454964 SNX14Q9Y5W7 946 aa11.11□□□□□ -0.63
ATXN3-205ENST00000454964 TNKSO95271 1327 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 NEDD4P46934 1319 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 PRC1O43663 620 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 BMP3P12645 472 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 GJA5P36382 358 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 SLC1A4P43007 532 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-205ENST00000454964 ASPRV1Q53RT3 343 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 LBX2Q6XYB7 198 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 MB21D2Q8IYB1 491 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-205ENST00000454964 PNMA1Q8ND90 353 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 BRI3BPQ8WY22 251 aa11.1□□□□□ -0.63
ATXN3-205ENST00000454964 JAKMIP1Q96N16 626 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms