RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 ABHD8Q96I13 439 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 RTFDC1Q9BY42 306 aaPredicted RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 XPO4Q9C0E2 1151 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 TLL2Q9Y6L7 1015 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 DUOX1Q9NRD9 1551 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 WDHD1O75717 1129 aaPredicted RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 MBD4O95243 580 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 CALM1P0DP23 149 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 CALM2P0DP24 149 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 CALM3P0DP25 149 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 CDC27P30260 824 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 NT5DC1Q5TFE4 455 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 PI16Q6UXB8 463 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 MICU3Q86XE3 530 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 CNNM3Q8NE01 707 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 GTPBP4Q9BZE4 634 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 VPS33BQ9H267 617 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 GNL3LQ9NVN8 582 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 RBM28Q9NW13 759 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 OGFRQ9NZT2 677 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
GTF3C2-206ENST00000454704 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 SEMA3EO15041 775 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 AOC2O75106 756 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 BBOX1O75936 387 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 RAD17O75943 681 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 CELF2O95319 508 aaKnown RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 SLU7O95391 586 aaKnown RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 PTPREP23469 700 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 SP8Q8IXZ3 490 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 MAGEB6Q8N7X4 407 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 ZNF397Q8NF99 534 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 L2HGDHQ9H9P8 463 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 LRRC37AA6NMS7 1700 aa12.1□□□□□ -0.47
GTF3C2-206ENST00000454704 ZNF804BA4D1E1 1349 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 TDO2P48775 406 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 UBASH3AP57075 661 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 GRAPQ13588 217 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 CREBRFQ8IUR6 639 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 ENOX1Q8TC92 643 aaKnown RBP12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 TRPM4Q8TD43 1214 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 ESR2Q92731 530 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
GTF3C2-206ENST00000454704 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 YDJCA8MPS7 323 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 SERPINC1P01008 464 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 TPM1P09493 284 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 UBE4AQ14139 1066 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 SAPCD2Q86UD0 394 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 VSTM4Q8IW00 320 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 FAM177A1Q8N128 213 aaPredicted RBP12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 CRACR2BQ8N4Y2 399 aaPredicted RBP12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 UBAC1Q9BSL1 405 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 TMX1Q9H3N1 280 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 ZNF408Q9H9D4 720 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 BRMS1Q9HCU9 246 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
GTF3C2-206ENST00000454704 ARHGAP6O43182 974 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 MARCKSP29966 332 aaPredicted RBP12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 HIRAP54198 1017 aaPredicted RBP12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 TNIP1Q15025 636 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 POSTNQ15063 836 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 ARMCX5Q6P1M9 558 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 ZNF654Q8IZM8 581 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 PHKBQ93100 1093 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 FERMT2Q96AC1 680 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms