RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 LPAR1Q92633 364 aa17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 ZFYVE28Q9HCC9 887 aa17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 PNMA3Q9UL41 463 aa17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 ERICH2A1L162 156 aa17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 SART3Q15020 963 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 TREML2Q5T2D2 321 aa17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 CYB5R4Q7L1T6 521 aa17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 F5H6K3 240 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 MCM5P33992 734 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 NOVP48745 357 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 KLRC3Q07444 240 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 RASEFQ8IZ41 740 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 NKX2-3Q8TAU0 364 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 KCNB2Q92953 911 aa17.18■□□□□ 0.34
NCKIPSD-207ENST00000453349 IFIT3O14879 490 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 WDR46O15213 610 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 HSPA1AP0DMV8 641 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 HSPA1BP0DMV9 641 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 VCAM1P19320 739 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 IRX3P78415 501 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 GMCL1P1Q8NEA9 526 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 PARK7Q99497 189 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 CFHR5Q9BXR6 569 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 RPAP3Q9H6T3 665 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 SNX14Q9Y5W7 946 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 TNKSO95271 1327 aa17.17■□□□□ 0.34
NCKIPSD-207ENST00000453349 SEC24BO95487 1268 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 PSMA5P28066 241 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 CRHR2Q13324 411 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 CHST3Q7LGC8 479 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 MB21D2Q8IYB1 491 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 ANKS1AQ92625 1134 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 MTA3Q9BTC8 594 aa17.16■□□□□ 0.34
NCKIPSD-207ENST00000453349 PRC1O43663 620 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 CYP2C8P10632 490 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 WTAPQ15007 396 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 ADCK5Q3MIX3 580 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 RCSD1Q6JBY9 416 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 TMTC2Q8N394 836 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 ENAHQ8N8S7 591 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 SMCR8Q8TEV9 937 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 TMEM87BQ96K49 555 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 ASCC2Q9H1I8 757 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 HOXC10Q9NYD6 342 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 MTMR7Q9Y216 660 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 PTPRFP10586 1907 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 LOC285556D6RIA3 1793 aa17.15■□□□□ 0.34
NCKIPSD-207ENST00000453349 TLR2O60603 784 aa17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 NDUFB10O96000 172 aa17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 CTCFP49711 727 aaPredicted RBP17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 COG2Q14746 738 aa17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 TMEM67Q5HYA8 995 aa17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 DHX32Q7L7V1 743 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 JAKMIP1Q96N16 626 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 TSKSQ9UJT2 592 aa17.14■□□□□ 0.33
NCKIPSD-207ENST00000453349 MYH4Q9Y623 1939 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 FOXN1O15353 648 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 BMP3P12645 472 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 SLC1A4P43007 532 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 GCLCP48506 637 aaPredicted RBP17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 ANTXR2P58335 489 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 SEC23AQ15436 765 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 PNMA1Q8ND90 353 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 GMCL1Q96IK5 515 aa17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 ISY1Q9ULR0 285 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-207ENST00000453349 GPR25O00155 361 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms