RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FAM184AQ8NB25 1140 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 KLRG1Q96E93 195 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 SH2D4AQ9H788 454 aa14.59□□□□□ -0.07
HLA-DPA1-244ENST00000453337 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 CTDNEP1O95476 244 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PARP1P09874 1014 aaKnown RBP14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 MAP3K9P80192 1104 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 NUCB2P80303 420 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 NTRK3Q16288 839 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SIAH1Q8IUQ4 282 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 TRIM22Q8IYM9 498 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 CDCA5Q96FF9 252 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 WRNIP1Q96S55 665 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PICK1Q9NRD5 415 aa14.58□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PTPDC1A2A3K4 754 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 INPP5BP32019 993 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DDIT3P35638 169 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 IREB2P48200 963 aaKnown RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 AKAP17AQ02040 695 aaKnown RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ASPRV1Q53RT3 343 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 LARP1BQ659C4 914 aaKnown RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SCYL3Q8IZE3 742 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 LRRC47Q8N1G4 583 aaKnown RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 GLIS2Q9BZE0 524 aaPredicted RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 NMRK2Q9NPI5 230 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 TMX2Q9Y320 296 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 BAZ2BQ9UIF8 2168 aaKnown RBP14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DOCK1Q14185 1865 aa14.57□□□□□ -0.08
HLA-DPA1-244ENST00000453337 UTRNP46939 3433 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 F5H6K3 240 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 JAK2O60674 1132 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PDHBP11177 359 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 KLRC3Q07444 240 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 NOL9Q5SY16 702 aaKnown RBP14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 GPATCH4Q5T3I0 446 aaKnown RBP14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 MAP1SQ66K74 1059 aaPredicted RBP14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SLFN13Q68D06 897 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ARMC9Q7Z3E5 817 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 CLEC10AQ8IUN9 316 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ZNF526Q8TF50 670 aaPredicted RBP14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DCAF4Q8WV16 495 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 WASF1Q92558 559 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DDX11Q96FC9 970 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 AS3MTQ9HBK9 375 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 RBM27Q9P2N5 1060 aaKnown RBP14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 MTMR7Q9Y216 660 aa14.56□□□□□ -0.08
HLA-DPA1-244ENST00000453337 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 KLRF2D3W0D1 207 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 FMNL1O95466 1100 aaPredicted RBP14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PRKG1Q13976 671 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 TTLL12Q14166 644 aaPredicted RBP14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 USP17L2Q6R6M4 530 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 RGS22Q8NE09 1264 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ZKSCAN4Q969J2 545 aaPredicted RBP14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 WDR18Q9BV38 432 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 RNF26Q9BY78 433 aaPredicted RBP14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 CSADQ9Y600 493 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 STK36Q9NRP7 1315 aa14.55□□□□□ -0.08
HLA-DPA1-244ENST00000453337 A0A1W2PRG0 241 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PRPF3O43395 683 aaKnown RBP14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 RAD21O60216 631 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PTPRAP18433 802 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SLC1A4P43007 532 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ZNF543Q08ER8 600 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 MAP3K11Q16584 847 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 NBPF11Q86T75 865 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ANKRD13AQ8IZ07 590 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 STAG2Q8N3U4 1231 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 CCDC82Q8N4S0 544 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 ACER1Q8TDN7 264 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PHKBQ93100 1093 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 GMCL1Q96IK5 515 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SLC26A6Q9BXS9 759 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 V9GY48 417 aaPredicted RBP14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SSC5DA1L4H1 1573 aa14.54□□□□□ -0.08
HLA-DPA1-244ENST00000453337 WDR33Q9C0J8 1336 aaKnown RBP14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 USP17L10C9JJH3 530 aa14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 STX6O43752 255 aa14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 DEXIO95424 95 aa14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 BMP3P12645 472 aa14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 FDPSP14324 419 aaKnown RBP14.53□□□□□ -0.08
HLA-DPA1-244ENST00000453337 SYT1P21579 422 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms