RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 TOMM22Q9NS69 142 aa18.38■□□□□ 0.53
VPS8-213ENST00000453056 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
VPS8-213ENST00000453056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
VPS8-213ENST00000453056 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 WDR46O15213 610 aaKnown RBP18.37■□□□□ 0.53
VPS8-213ENST00000453056 ORC4O43929 436 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 RANBP6O60518 1105 aaKnown RBP18.37■□□□□ 0.53
VPS8-213ENST00000453056 CHMLP26374 656 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 HAND2P61296 217 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 TFAP4Q01664 338 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
VPS8-213ENST00000453056 ARHGAP39Q9C0H5 1083 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 NYAP2Q9P242 653 aa18.37■□□□□ 0.53
VPS8-213ENST00000453056 RAD21O60216 631 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 TTLL1O95922 423 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 SIAH1Q8IUQ4 282 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 TRIM47Q96LD4 638 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 MORF4L1Q9UBU8 362 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 PTPN22Q9Y2R2 807 aa18.36■□□□□ 0.53
VPS8-213ENST00000453056 HTTP42858 3142 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 IGKV6D-41A0A0C4DH26 115 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 ZNF213O14771 459 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 TNPO2O14787 897 aaKnown RBP18.35■□□□□ 0.53
VPS8-213ENST00000453056 CAPN15O75808 1086 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 ECM2O94769 699 aaPredicted RBP18.35■□□□□ 0.53
VPS8-213ENST00000453056 NT5C2P49902 561 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 IMMTQ16891 758 aaKnown RBP18.35■□□□□ 0.53
VPS8-213ENST00000453056 FAM47AQ5JRC9 791 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 RRP12Q5JTH9 1297 aaKnown RBP18.35■□□□□ 0.53
VPS8-213ENST00000453056 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 SPICE1Q8N0Z3 855 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 GPRC5AQ8NFJ5 357 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 MTMR4Q9NYA4 1195 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
VPS8-213ENST00000453056 MYPNQ86TC9 1320 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 FGRP09769 529 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 CCNA1P78396 465 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 CAP1Q01518 475 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 AKNAD1Q5T1N1 836 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 CCAR1Q8IX12 1150 aaKnown RBP18.34■□□□□ 0.53
VPS8-213ENST00000453056 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 COA7Q96BR5 231 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 HOXC10Q9NYD6 342 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 SRRDQ9UH36 339 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 RABGAP1Q9Y3P9 1069 aa18.34■□□□□ 0.53
VPS8-213ENST00000453056 RLFQ13129 1914 aa18.33■□□□□ 0.53
VPS8-213ENST00000453056 FLOT1O75955 427 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 ERVK-9P63128 1117 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 ERVK-24P63145 666 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 COG2Q14746 738 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 LBX2Q6XYB7 198 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 TBC1D10CQ8IV04 446 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 RAET1EQ8TD07 263 aa18.33■□□□□ 0.52
VPS8-213ENST00000453056 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
VPS8-213ENST00000453056 SGSM2O43147 1006 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 NDUFB10O96000 172 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 CTGFP29279 349 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 SLC9C1Q4G0N8 1177 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 KIAA1755Q5JYT7 1200 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 CASC1Q6TDU7 716 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 LRRC47Q8N1G4 583 aaKnown RBP18.32■□□□□ 0.52
VPS8-213ENST00000453056 MB21D1Q8N884 522 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 IL25Q9H293 177 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
VPS8-213ENST00000453056 STX8Q9UNK0 236 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
VPS8-213ENST00000453056 MAPK4P31152 587 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 SKAP1Q86WV1 359 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 GMCL1P1Q8NEA9 526 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 ESR2Q92731 530 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 MKL1Q969V6 931 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
VPS8-213ENST00000453056 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
VPS8-213ENST00000453056 F5H6K3 240 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 PRKCZQ05513 592 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 KLRC3Q07444 240 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
VPS8-213ENST00000453056 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
VPS8-213ENST00000453056 ISY1Q9ULR0 285 aaKnown RBP18.3■□□□□ 0.52
VPS8-213ENST00000453056 NEDD4P46934 1319 aa18.29■□□□□ 0.52
VPS8-213ENST00000453056 COL11A1P12107 1806 aaPredicted RBP18.29■□□□□ 0.52
VPS8-213ENST00000453056 DSG3P32926 999 aa18.29■□□□□ 0.52
VPS8-213ENST00000453056 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
VPS8-213ENST00000453056 ARMC5Q96C12 935 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms