RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PDE2AO00408 941 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 PDE8AO60658 829 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 CPNE3O75131 537 aaKnown RBP5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 TRPA1O75762 1119 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 CPEP16870 476 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 GBP2P32456 591 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 EIF4A3P38919 411 aaKnown RBP5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 DOC2BQ14184 412 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 LONRF1Q17RB8 773 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 NXNQ6DKJ4 435 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 IGF2-ASQ6U949 168 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 PI16Q6UXB8 463 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 MORC1Q86VD1 984 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 TXNRD3Q86VQ6 643 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 PASD1Q8IV76 773 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 SNRNP27Q8WVK2 155 aaKnown RBP5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 NINJ1Q92982 152 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 HOOK2Q96ED9 719 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 POP1Q99575 1024 aaKnown RBP5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 OSMRQ99650 979 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZFYVE28Q9HCC9 887 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 LATS2Q9NRM7 1088 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 AKAP2Q9Y2D5 859 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 H3BRJ5 948 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 DIAPH1O60610 1272 aaKnown RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 ADAM23O75077 832 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 FURINP09958 794 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 SRGNP10124 158 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 CDC25BP30305 580 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 HALP42357 657 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 ITKQ08881 620 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 SSRP1Q08945 709 aaKnown RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 SEPT6Q14141 434 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 TOMM20Q15388 145 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 PEAR1Q5VY43 1037 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 PCNX4Q63HM2 1172 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 FAM117BQ6P1L5 589 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 CCDC81Q6ZN84 652 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 MMS22LQ6ZRQ5 1243 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZBTB46Q86UZ6 589 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 MAGEB6Q8N7X4 407 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 TMEM102Q8N9M5 508 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 IPO4Q8TEX9 1081 aaKnown RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZNF296Q8WUU4 475 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 SKA1Q96BD8 255 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 TSPAN18Q96SJ8 248 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 HERPUD2Q9BSE4 406 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 RSRP1Q9BUV0 290 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 CARD10Q9BWT7 1032 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 ADAM19Q9H013 955 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 SH2B1Q9NRF2 756 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 TPSG1Q9NRR2 321 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZNF180Q9UJW8 692 aa5.4□□□□□ -1.54
HMGB3P21-201ENST00000452483 A0A087X0B3 334 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 VSTM5A8MXK1 200 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 GOLIM4O00461 696 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 FIBPO43427 364 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 POLR3DP05423 398 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 HSP90AB1P08238 724 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 RBP3P10745 1247 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 TRIM27P14373 513 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 HTR3AP46098 478 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 SARSP49591 514 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 CABP4P57796 275 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 BIRC3Q13489 604 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 PUM3Q15397 648 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 ALDH1L2Q3SY69 923 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 LARP1BQ659C4 914 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 FTSJ3Q8IY81 847 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 GALNT11Q8NCW6 608 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 ZSWIM2Q8NEG5 633 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 RIN3Q8TB24 985 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 EPS8L3Q8TE67 593 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 SHDQ96IW2 340 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 MPP4Q96JB8 637 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 NOC4LQ9BVI4 516 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 NT5C1AQ9BXI3 368 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 RTFDC1Q9BY42 306 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 BHLHE41Q9C0J9 482 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 MRPL18Q9H0U6 180 aaKnown RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 OBP2AQ9NY56 170 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 C9orf78Q9NZ63 289 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 CLIC5Q9NZA1 410 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 SOX13Q9UN79 622 aa5.39□□□□□ -1.55
HMGB3P21-201ENST00000452483 TTC36A6NLP5 189 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 FSCN2O14926 492 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 PRPF3O43395 683 aaKnown RBP5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 CBFA2T2O43439 604 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 RAPGEF3O95398 923 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 NOS3P29474 1203 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 FXNQ16595 210 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 CCDC92Q53HC0 331 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 AKAP4Q5JQC9 854 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 HYIQ5T013 277 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 C1QTNF12Q5T7M4 302 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 RNF180Q86T96 592 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 ZSCAN30Q86W11 494 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
HMGB3P21-201ENST00000452483 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms