RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 KREMEN1Q96MU8 473 aa6.04□□□□□ -1.44
VPS8-211ENST00000452140 DEPDC7Q96QD5 511 aa6.04□□□□□ -1.44
VPS8-211ENST00000452140 SUCOQ9UBS9 1254 aaKnown RBP6.04□□□□□ -1.44
VPS8-211ENST00000452140 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
VPS8-211ENST00000452140 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
VPS8-211ENST00000452140 CCNFP41002 786 aa6.03□□□□□ -1.44
VPS8-211ENST00000452140 PMS1P54277 932 aaKnown RBP6.03□□□□□ -1.44
VPS8-211ENST00000452140 GIMAP6Q6P9H5 292 aa6.03□□□□□ -1.44
VPS8-211ENST00000452140 ZAR1Q86SH2 424 aa6.03□□□□□ -1.44
VPS8-211ENST00000452140 MKRN2Q9H000 416 aaKnown RBP6.03□□□□□ -1.44
VPS8-211ENST00000452140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS8-211ENST00000452140 COL17A1Q9UMD9 1497 aaPredicted RBP6.02□□□□□ -1.44
VPS8-211ENST00000452140 LRRN2O75325 713 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 AXDND1Q5T1B0 1012 aaPredicted RBP6.02□□□□□ -1.45
VPS8-211ENST00000452140 DCAF15Q66K64 600 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 ZNF765Q7L2R6 523 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 CCDC144CPQ8IYA2 1237 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 MRFAP1L1Q96HT8 127 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 DHRS1Q96LJ7 313 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 MSRB2Q9Y3D2 182 aa6.02□□□□□ -1.45
VPS8-211ENST00000452140 KRTAP9-6A0A140TA67 174 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 PDPK1O15530 556 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 HYAL3O43820 417 aaPredicted RBP6.01□□□□□ -1.45
VPS8-211ENST00000452140 SMARCA5O60264 1052 aaPredicted RBP6.01□□□□□ -1.45
VPS8-211ENST00000452140 CBX7O95931 251 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 F13BP05160 661 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 ETV3P41162 512 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 NFE2L2Q16236 605 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 NBPF12Q5TAG4 269 aaPredicted RBP6.01□□□□□ -1.45
VPS8-211ENST00000452140 HEXIM2Q96MH2 286 aaKnown RBP6.01□□□□□ -1.45
VPS8-211ENST00000452140 PRDM5Q9NQX1 630 aaPredicted RBP6.01□□□□□ -1.45
VPS8-211ENST00000452140 U3KQE9 123 aa6.01□□□□□ -1.45
VPS8-211ENST00000452140 PRR33A8MZF0 331 aa6□□□□□ -1.45
VPS8-211ENST00000452140 WDR64B1ANS9 1081 aa6□□□□□ -1.45
VPS8-211ENST00000452140 EPHX1P07099 455 aa6□□□□□ -1.45
VPS8-211ENST00000452140 NFIAQ12857 509 aa6□□□□□ -1.45
VPS8-211ENST00000452140 SNW1Q13573 536 aaKnown RBP6□□□□□ -1.45
VPS8-211ENST00000452140 NCAPHQ15003 741 aa6□□□□□ -1.45
VPS8-211ENST00000452140 RNF43Q68DV7 783 aa6□□□□□ -1.45
VPS8-211ENST00000452140 OGFOD3Q6PK18 319 aa6□□□□□ -1.45
VPS8-211ENST00000452140 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
VPS8-211ENST00000452140 GIMAP7Q8NHV1 300 aa6□□□□□ -1.45
VPS8-211ENST00000452140 RNF141Q8WVD5 230 aa6□□□□□ -1.45
VPS8-211ENST00000452140 MKL1Q969V6 931 aa6□□□□□ -1.45
VPS8-211ENST00000452140 VWCEQ96DN2 955 aa6□□□□□ -1.45
VPS8-211ENST00000452140 FGD4Q96M96 766 aa6□□□□□ -1.45
VPS8-211ENST00000452140 DNAJC7Q99615 494 aa6□□□□□ -1.45
VPS8-211ENST00000452140 HAUS7Q99871 368 aa6□□□□□ -1.45
VPS8-211ENST00000452140 LGR4Q9BXB1 951 aa6□□□□□ -1.45
VPS8-211ENST00000452140 PFDN2Q9UHV9 154 aa6□□□□□ -1.45
VPS8-211ENST00000452140 SHOXO15266 292 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 CBFA2T2O43439 604 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 SUSD5O60279 629 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 FSTP19883 344 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 RNF4P78317 190 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 BBS9Q3SYG4 887 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 MTERF2Q49AM1 385 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 SFRP5Q5T4F7 317 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 ZNF746Q6NUN9 644 aaPredicted RBP5.99□□□□□ -1.45
VPS8-211ENST00000452140 SPATC1Q76KD6 591 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 EEPD1Q7L9B9 569 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 SLC51AQ86UW1 340 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 JAZF1Q86VZ6 243 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 SHKBP1Q8TBC3 707 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 Q96M66 194 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 DBNDD2Q9BQY9 259 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 ASPNQ9BXN1 380 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 CCDC113Q9H0I3 377 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 LRRC4CQ9HCJ2 640 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 SUSD2Q9UGT4 822 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 ZNF451Q9Y4E5 1061 aa5.99□□□□□ -1.45
VPS8-211ENST00000452140 DIAPH1O60610 1272 aaKnown RBP5.98□□□□□ -1.45
VPS8-211ENST00000452140 IGLV1-40P01703 118 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 ITIH2P19823 946 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 CYP7A1P22680 504 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
VPS8-211ENST00000452140 AUHQ13825 339 aaKnown RBP5.98□□□□□ -1.45
VPS8-211ENST00000452140 RASGRF1Q13972 1273 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 CYP27C1Q4G0S4 372 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 HEATR6Q6AI08 1181 aaKnown RBP5.98□□□□□ -1.45
VPS8-211ENST00000452140 NOP9Q86U38 636 aaKnown RBP5.98□□□□□ -1.45
VPS8-211ENST00000452140 ADCY4Q8NFM4 1077 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 PPP1R14AQ96A00 147 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 APEX2Q9UBZ4 518 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 GTF2IRD1Q9UHL9 959 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 FBXL21Q9UKT6 434 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 RNF112Q9ULX5 631 aa5.98□□□□□ -1.45
VPS8-211ENST00000452140 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
VPS8-211ENST00000452140 NBPF9Q3BBW0 867 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 SLC10A6Q3KNW5 377 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 SV2CQ496J9 727 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 DUSP27Q5VZP5 1158 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 TMC3Q7Z5M5 1100 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 ADAT2Q7Z6V5 191 aaKnown RBP5.97□□□□□ -1.45
VPS8-211ENST00000452140 C7orf61Q8IZ16 206 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 DTWD2Q8NBA8 298 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 SMARCC1Q92922 1105 aaPredicted RBP5.97□□□□□ -1.45
VPS8-211ENST00000452140 FBXL18Q96ME1 805 aa5.97□□□□□ -1.45
VPS8-211ENST00000452140 OSBPL1AQ9BXW6 950 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms