RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RPTORQ8N122 1335 aa25.89■■□□□ 1.74
C9orf3-208ENST00000451893 RNF113AO15541 343 aaKnown RBP25.89■■□□□ 1.74
C9orf3-208ENST00000451893 HDAC1Q13547 482 aaPredicted RBP25.89■■□□□ 1.74
C9orf3-208ENST00000451893 TTC41PQ6P2S7 1318 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 PLXNB2O15031 1838 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 TDO2P48775 406 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 C16orf86Q6ZW13 317 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 STK11IPQ8N1F8 1099 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 TRIB2Q92519 343 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 FSD1Q9BTV5 496 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 MKNK2Q9HBH9 465 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 PAK6Q9NQU5 681 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-208ENST00000451893 HOXC10Q9NYD6 342 aa25.88■■□□□ 1.73
C9orf3-208ENST00000451893 MINDY4BA8MYZ0 360 aa25.87■■□□□ 1.73
C9orf3-208ENST00000451893 COG2Q14746 738 aa25.87■■□□□ 1.73
C9orf3-208ENST00000451893 CTR9Q6PD62 1173 aa25.87■■□□□ 1.73
C9orf3-208ENST00000451893 LPAR1Q92633 364 aa25.87■■□□□ 1.73
C9orf3-208ENST00000451893 APBA2Q99767 749 aa25.87■■□□□ 1.73
C9orf3-208ENST00000451893 A0A1W2PRG0 241 aa25.86■■□□□ 1.73
C9orf3-208ENST00000451893 SPDYE16A6NNV3 312 aaPredicted RBP25.86■■□□□ 1.73
C9orf3-208ENST00000451893 XRCC5P13010 732 aaKnown RBP25.86■■□□□ 1.73
C9orf3-208ENST00000451893 PRKAR2AP13861 404 aaKnown RBP25.86■■□□□ 1.73
C9orf3-208ENST00000451893 GNAT2P19087 354 aa25.86■■□□□ 1.73
C9orf3-208ENST00000451893 PLS1Q14651 629 aa25.86■■□□□ 1.73
C9orf3-208ENST00000451893 CLEC10AQ8IUN9 316 aa25.86■■□□□ 1.73
C9orf3-208ENST00000451893 SPICE1Q8N0Z3 855 aa25.86■■□□□ 1.73
C9orf3-208ENST00000451893 STRBPQ96SI9 672 aaKnown RBP25.86■■□□□ 1.73
C9orf3-208ENST00000451893 NR2E3Q9Y5X4 410 aa25.86■■□□□ 1.73
C9orf3-208ENST00000451893 MKI67P46013 3256 aaKnown RBP25.86■■□□□ 1.73
C9orf3-208ENST00000451893 FLOT1O75955 427 aa25.85■■□□□ 1.73
C9orf3-208ENST00000451893 TRIM32Q13049 653 aa25.85■■□□□ 1.73
C9orf3-208ENST00000451893 ZNF287Q9HBT7 754 aa25.85■■□□□ 1.73
C9orf3-208ENST00000451893 GOPCQ9HD26 462 aa25.85■■□□□ 1.73
C9orf3-208ENST00000451893 H0YGN5 161 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 GPAA1O43292 621 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 MX1P20591 662 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 MAP2K5Q13163 448 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 ANKRD45Q5TZF3 282 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 LBX2Q6XYB7 198 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 NACAP1Q9BZK3 213 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 KANSL2Q9H9L4 492 aa25.84■■□□□ 1.73
C9orf3-208ENST00000451893 EVI5O60447 810 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 CNMDO75829 334 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 MFSD14CQ5VZR4 134 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 GIMAP6Q6P9H5 292 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 NECAB2Q7Z6G3 386 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 OSBP2Q969R2 916 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 VCPKMTQ9H867 229 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 BTBD7Q9P203 1132 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 TMX2Q9Y320 296 aa25.83■■□□□ 1.73
C9orf3-208ENST00000451893 SLC15A5A6NIM6 579 aa25.82■■□□□ 1.72
C9orf3-208ENST00000451893 WDR46O15213 610 aaKnown RBP25.82■■□□□ 1.72
C9orf3-208ENST00000451893 IGHDP01880 384 aa25.82■■□□□ 1.72
C9orf3-208ENST00000451893 HABP4Q5JVS0 413 aaKnown RBP25.82■■□□□ 1.72
C9orf3-208ENST00000451893 MORN1Q5T089 497 aa25.82■■□□□ 1.72
C9orf3-208ENST00000451893 MB21D1Q8N884 522 aa25.82■■□□□ 1.72
C9orf3-208ENST00000451893 PAWRQ96IZ0 340 aaKnown RBP25.82■■□□□ 1.72
C9orf3-208ENST00000451893 EEF2P13639 858 aaKnown RBP25.81■■□□□ 1.72
C9orf3-208ENST00000451893 PTPREP23469 700 aa25.81■■□□□ 1.72
C9orf3-208ENST00000451893 DPP9Q86TI2 863 aa25.81■■□□□ 1.72
C9orf3-208ENST00000451893 ANKLE1Q8NAG6 615 aa25.81■■□□□ 1.72
C9orf3-208ENST00000451893 CRISPLD2Q9H0B8 497 aa25.81■■□□□ 1.72
C9orf3-208ENST00000451893 GSG1L2A8MUP6 293 aa25.8■■□□□ 1.72
C9orf3-208ENST00000451893 SMIM22K7EJ46 135 aa25.8■■□□□ 1.72
C9orf3-208ENST00000451893 M0R2C6 588 aa25.8■■□□□ 1.72
C9orf3-208ENST00000451893 CCL14Q16627 93 aa25.8■■□□□ 1.72
C9orf3-208ENST00000451893 SBK1Q52WX2 424 aa25.8■■□□□ 1.72
C9orf3-208ENST00000451893 NCAPG2Q86XI2 1143 aa25.8■■□□□ 1.72
C9orf3-208ENST00000451893 ZNF444Q8N0Y2 327 aaPredicted RBP25.8■■□□□ 1.72
C9orf3-208ENST00000451893 SLC3A2P08195 630 aaKnown RBP25.79■■□□□ 1.72
C9orf3-208ENST00000451893 DSG3P32926 999 aa25.79■■□□□ 1.72
C9orf3-208ENST00000451893 CACNB2Q08289 660 aaPredicted RBP25.79■■□□□ 1.72
C9orf3-208ENST00000451893 UBE2Q1Q7Z7E8 422 aa25.79■■□□□ 1.72
C9orf3-208ENST00000451893 SPATC1LQ9H0A9 340 aa25.79■■□□□ 1.72
C9orf3-208ENST00000451893 SLC5A4Q9NY91 659 aa25.79■■□□□ 1.72
C9orf3-208ENST00000451893 CNGA1P29973 690 aa25.78■■□□□ 1.72
C9orf3-208ENST00000451893 POTEEQ6S8J3 1075 aa25.78■■□□□ 1.72
C9orf3-208ENST00000451893 OTUD7AQ8TE49 926 aaPredicted RBP25.78■■□□□ 1.72
C9orf3-208ENST00000451893 USP6NLQ92738 828 aa25.78■■□□□ 1.72
C9orf3-208ENST00000451893 MOV10L1Q9BXT6 1211 aaKnown RBP25.78■■□□□ 1.72
C9orf3-208ENST00000451893 NBPF3Q9H094 633 aa25.78■■□□□ 1.72
C9orf3-208ENST00000451893 NAPBQ9H115 298 aa25.78■■□□□ 1.72
C9orf3-208ENST00000451893 PATL2C9JE40 543 aaKnown RBP25.77■■□□□ 1.72
C9orf3-208ENST00000451893 CHRDL2Q6WN34 429 aa25.77■■□□□ 1.72
C9orf3-208ENST00000451893 PI4K2BQ8TCG2 481 aa25.77■■□□□ 1.72
C9orf3-208ENST00000451893 ATG4CQ96DT6 458 aa25.77■■□□□ 1.72
C9orf3-208ENST00000451893 COLQQ9Y215 455 aaPredicted RBP25.77■■□□□ 1.72
C9orf3-208ENST00000451893 CTDP1Q9Y5B0 961 aaPredicted RBP25.77■■□□□ 1.72
C9orf3-208ENST00000451893 STRNO43815 780 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 ERCC3P19447 782 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 PDE4BQ07343 736 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 GRB14Q14449 540 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 KIAA1755Q5JYT7 1200 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 MAP3K21Q5TCX8 1036 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 DIS3LQ8TF46 1054 aaKnown RBP25.76■■□□□ 1.71
C9orf3-208ENST00000451893 C11orf49Q9H6J7 331 aa25.76■■□□□ 1.71
C9orf3-208ENST00000451893 ISY1Q9ULR0 285 aaKnown RBP25.76■■□□□ 1.71
C9orf3-208ENST00000451893 MYH4Q9Y623 1939 aa25.75■■□□□ 1.71
C9orf3-208ENST00000451893 CCND3P30281 292 aaPredicted RBP25.75■■□□□ 1.71
C9orf3-208ENST00000451893 SMC5Q8IY18 1101 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms